RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 SYT14P1Q58G82 188 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 SPANXN4Q5MJ08 99 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 NCMAPQ5T1S8 102 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 ANKRD46Q86W74 232 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 ZNF619Q8N2I2 560 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 CIARTQ8N365 385 aaPredicted RBP12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 AKAP1Q92667 903 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 ZNF75CPQ92670 426 aaPredicted RBP12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 ROPN1LQ96C74 230 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 CCDC115Q96NT0 180 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 POTEKPQ9BYX7 375 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 NUF2Q9BZD4 464 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 QRSL1Q9H0R6 528 aaKnown RBP12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 EXOSC3Q9NQT5 275 aaKnown RBP12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 RAB21Q9UL25 225 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 RNF115Q9Y4L5 304 aa12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 SPIN1Q9Y657 262 aaPredicted RBP12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 V9GYY5 206 aaPredicted RBP12.74□□□□□ -0.37
SNRNP40-203ENST00000463988 IGKV3D-15A0A087WSY6 115 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 SULT2B1O00204 365 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 DNPH1O43598 174 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 CD3EP07766 207 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 CHI3L1P36222 383 aaPredicted RBP12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 CLK1P49759 484 aaKnown RBP12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 CASP9P55211 416 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 KCNJ10P78508 379 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 LRRC74AQ0VAA2 488 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 FUT5Q11128 374 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 TSC22D1Q15714 1073 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 FAM174BQ3ZCQ3 159 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 TNFAIP8L2Q6P589 184 aaPredicted RBP12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 DNAJC14Q6Y2X3 702 aaPredicted RBP12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 FRRS1Q6ZNA5 592 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 Q71RC1 249 aaPredicted RBP12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 BHLHA15Q7RTS1 189 aaPredicted RBP12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 OLIG3Q7RTU3 272 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 GALNT5Q7Z7M9 940 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 MTDHQ86UE4 582 aaKnown RBP12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 P2RY8Q86VZ1 359 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 CMIPQ8IY22 773 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 TRIML2Q8N7C3 387 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 RAB3IL1Q8TBN0 382 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 PIWIL2Q8TC59 973 aaKnown RBP12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 RAB8BQ92930 207 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 SLC35A5Q9BS91 424 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 CCDC106Q9BWC9 280 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 KCNK9Q9NPC2 374 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 MARCOQ9UEW3 520 aaPredicted RBP12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 CHRNA9Q9UGM1 479 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 LIPT1Q9Y234 373 aa12.73□□□□□ -0.37
SNRNP40-203ENST00000463988 TRIM64A6NGJ6 449 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 TRIM64BA6NI03 449 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 HMGN4O00479 90 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 PMS2P2O95744 297 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 FESP07332 822 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 COX5AP20674 150 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 MAGEA8P43361 318 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 ANXA11P50995 505 aaKnown RBP12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 ATP5J2P56134 94 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 HPCAP84074 193 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 BST1Q10588 318 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 CAPRIN1Q14444 709 aaKnown RBP12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 CEP85LQ5SZL2 805 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 ABLIM2Q6H8Q1 611 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 ALKBH2Q6NS38 261 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 SEZ6L2Q6UXD5 910 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 GRINAQ7Z429 371 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 SPATA19Q7Z5L4 167 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 ARFGAP2Q8N6H7 521 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 LILRB1Q8NHL6 650 aaPredicted RBP12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 ZNF563Q8TA94 476 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 PMM1Q92871 262 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 FBXW5Q969U6 566 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 ZG16BQ96DA0 208 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 ZHX1-C8orf76Q96EF9 292 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 TRNT1Q96Q11 434 aaKnown RBP12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 CTPS2Q9NRF8 586 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 PNPOQ9NVS9 261 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 AIG1Q9NVV5 245 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 EMC3Q9P0I2 261 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 PRDM4Q9UKN5 801 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 HDGFL3Q9Y3E1 203 aa12.72□□□□□ -0.37
SNRNP40-203ENST00000463988 PRAMEF27A3QJZ7 478 aa12.71□□□□□ -0.37
SNRNP40-203ENST00000463988 CCDC154A6NI56 674 aa12.71□□□□□ -0.37
SNRNP40-203ENST00000463988 OVOL3O00110 214 aa12.71□□□□□ -0.37
SNRNP40-203ENST00000463988 BCAS1O75363 584 aaPredicted RBP12.71□□□□□ -0.37
SNRNP40-203ENST00000463988 HTR3AP46098 478 aa12.71□□□□□ -0.37
SNRNP40-203ENST00000463988 RPS4XP62701 263 aaKnown RBP12.71□□□□□ -0.37
SNRNP40-203ENST00000463988 CHRNEQ04844 493 aa12.71□□□□□ -0.37
SNRNP40-203ENST00000463988 ETFDHQ16134 617 aa12.71□□□□□ -0.37
SNRNP40-203ENST00000463988 ZNF672Q499Z4 452 aaPredicted RBP12.71□□□□□ -0.37
SNRNP40-203ENST00000463988 GPAT3Q53EU6 434 aa12.71□□□□□ -0.37
SNRNP40-203ENST00000463988 TIMM23BQ5SRD1 257 aa12.71□□□□□ -0.37
SNRNP40-203ENST00000463988 ZNF100Q8IYN0 542 aa12.71□□□□□ -0.37
SNRNP40-203ENST00000463988 TEX37Q96LM6 180 aa12.71□□□□□ -0.37
SNRNP40-203ENST00000463988 ZNF300Q96RE9 604 aaPredicted RBP12.71□□□□□ -0.37
SNRNP40-203ENST00000463988 CENPHQ9H3R5 247 aa12.71□□□□□ -0.37
SNRNP40-203ENST00000463988 MTHFD2LQ9H903 347 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms