RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 CHRNEQ04844 493 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 RASGEF1BQ0VAM2 473 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 MERTKQ12866 999 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 ITGADQ13349 1161 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 GNA13Q14344 377 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 PDK3Q15120 406 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 GSTA3Q16772 222 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 BEND6Q5SZJ8 279 aaPredicted RBP6.48□□□□□ -1.37
PTPRF-210ENST00000463041 SFRP5Q5T4F7 317 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 NXNQ6DKJ4 435 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 FRRS1Q6ZNA5 592 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 LRRC74BQ6ZQY2 392 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 PLEKHM3Q6ZWE6 761 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 SSX8Q7RTT4 187 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 MTDHQ86UE4 582 aaKnown RBP6.48□□□□□ -1.37
PTPRF-210ENST00000463041 P3H2Q8IVL5 708 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 CMIPQ8IY22 773 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 GABRG1Q8N1C3 465 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 ARFGAP2Q8N6H7 521 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 FAM71CQ8NEG0 241 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 ZNF563Q8TA94 476 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 MGARPQ8TDB4 240 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 ABHD3Q8WU67 409 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 TLCD1Q96CP7 247 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 MAELQ96JY0 434 aaKnown RBP6.48□□□□□ -1.37
PTPRF-210ENST00000463041 OR5B2Q96R09 309 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 ACTR6Q9GZN1 396 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 WDR55Q9H6Y2 383 aaPredicted RBP6.48□□□□□ -1.37
PTPRF-210ENST00000463041 C12orf49Q9H741 205 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 COQ10BQ9H8M1 238 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 NGBQ9NPG2 151 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 DLL4Q9NR61 685 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 TRAPPC4Q9Y296 219 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 HDGFL3Q9Y3E1 203 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 TLN2Q9Y4G6 2542 aa6.48□□□□□ -1.37
PTPRF-210ENST00000463041 GOLGA8QA0A0J9YX86 632 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 CENPVL1A0A0U1RR11 272 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.47□□□□□ -1.37
PTPRF-210ENST00000463041 PRAMEF27A3QJZ7 478 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 GOLGA8OA6NCC3 632 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 AGAP5A6NIR3 686 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 ZNF814B7Z6K7 855 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 GOLGA8NF8WBI6 632 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 FAAHO00519 579 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 RFXANKO14593 260 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 DNPH1O43598 174 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 GCM2O75603 506 aaPredicted RBP6.47□□□□□ -1.37
PTPRF-210ENST00000463041 H6PDO95479 791 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 PMS2P2O95744 297 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 ADAP00813 363 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 NR2F1P10589 423 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 TFPIP10646 304 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 IL32P24001 234 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 RYKP34925 604 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 OR3A2P47893 321 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 IDH2P48735 452 aaKnown RBP6.47□□□□□ -1.37
PTPRF-210ENST00000463041 DIO1P49895 249 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 NME5P56597 212 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 HPCAP84074 193 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 SYPL1Q16563 259 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 ZSWIM7Q19AV6 140 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 PDCD4Q53EL6 469 aaKnown RBP6.47□□□□□ -1.37
PTPRF-210ENST00000463041 SYT14P1Q58G82 188 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 ADAM5Q6NVV9 412 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 TFAP2EQ6VUC0 442 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 Q6ZT83 130 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 MSANTD1Q6ZTZ1 278 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 OLIG3Q7RTU3 272 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 GRINAQ7Z429 371 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 GALNT5Q7Z7M9 940 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 RNF130Q86XS8 419 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 ADGRG3Q86Y34 549 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 ZNF440Q8IYI8 595 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 PIWIL2Q8TC59 973 aaKnown RBP6.47□□□□□ -1.37
PTPRF-210ENST00000463041 ZNF75CPQ92670 426 aaPredicted RBP6.47□□□□□ -1.37
PTPRF-210ENST00000463041 KISS1RQ969F8 398 aaPredicted RBP6.47□□□□□ -1.37
PTPRF-210ENST00000463041 ZBTB9Q96C00 473 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 ZHX1-C8orf76Q96EF9 292 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 PLPPR2Q96GM1 343 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 ITCHQ96J02 903 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 HS3ST6Q96QI5 342 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 PSD2Q9BQI7 771 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 TMEM204Q9BSN7 226 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 INPP5KQ9BT40 448 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 CCDC106Q9BWC9 280 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 QRSL1Q9H0R6 528 aaKnown RBP6.47□□□□□ -1.37
PTPRF-210ENST00000463041 SLC38A1Q9H2H9 487 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 RMND5AQ9H871 391 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 UBTD1Q9HAC8 227 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 CTPS2Q9NRF8 586 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 SDR39U1Q9NRG7 319 aaPredicted RBP6.47□□□□□ -1.37
PTPRF-210ENST00000463041 THUMPD1Q9NXG2 353 aaKnown RBP6.47□□□□□ -1.37
PTPRF-210ENST00000463041 CALML5Q9NZT1 146 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 ZIM2Q9NZV7 527 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 CHRNA9Q9UGM1 479 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 ING1Q9UK53 422 aaPredicted RBP6.47□□□□□ -1.37
PTPRF-210ENST00000463041 ZNF232Q9UNY5 417 aa6.47□□□□□ -1.37
PTPRF-210ENST00000463041 IGKV3D-15A0A087WSY6 115 aa6.46□□□□□ -1.38
PTPRF-210ENST00000463041 TMED7-TICAM2A0A0A6YYA0 188 aa6.46□□□□□ -1.38
PTPRF-210ENST00000463041 IGHV3-15A0A0B4J1V0 119 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 176.6 ms