RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 ACRP10323 421 aa10.85□□□□□ -0.67
PDZRN3-203ENST00000462146 LCN1P31025 176 aa10.85□□□□□ -0.67
PDZRN3-203ENST00000462146 NAA10P41227 235 aaPredicted RBP10.85□□□□□ -0.67
PDZRN3-203ENST00000462146 TSPAN5P62079 268 aa10.85□□□□□ -0.67
PDZRN3-203ENST00000462146 PLAURQ03405 335 aa10.85□□□□□ -0.67
PDZRN3-203ENST00000462146 CEBPEQ15744 281 aa10.85□□□□□ -0.67
PDZRN3-203ENST00000462146 TRMT12Q53H54 448 aaKnown RBP10.85□□□□□ -0.67
PDZRN3-203ENST00000462146 HES5Q5TA89 166 aa10.85□□□□□ -0.67
PDZRN3-203ENST00000462146 LINGO2Q7L985 606 aa10.85□□□□□ -0.67
PDZRN3-203ENST00000462146 GPALPP1Q8IXQ4 340 aa10.85□□□□□ -0.67
PDZRN3-203ENST00000462146 OR2L3Q8NG85 312 aa10.85□□□□□ -0.67
PDZRN3-203ENST00000462146 BPIFA2Q96DR5 249 aa10.85□□□□□ -0.67
PDZRN3-203ENST00000462146 SDF2Q99470 211 aa10.85□□□□□ -0.67
PDZRN3-203ENST00000462146 SLC25A18Q9H1K4 315 aa10.85□□□□□ -0.67
PDZRN3-203ENST00000462146 MTHFD2LQ9H903 347 aaPredicted RBP10.85□□□□□ -0.67
PDZRN3-203ENST00000462146 WBP1LQ9NX94 342 aa10.85□□□□□ -0.67
PDZRN3-203ENST00000462146 STON1Q9Y6Q2 735 aa10.85□□□□□ -0.67
PDZRN3-203ENST00000462146 A0A1B0GVI7 797 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 A0A1W2PPL8 197 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 CARNS1A5YM72 827 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 FAM86C2PA6NEL3 165 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 M0R233 179 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 IMPA2O14732 288 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 ALDOBP05062 364 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 NAT1P18440 290 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 POU3F2P20265 443 aaPredicted RBP10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 PTGS2P35354 604 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 PSMB10P40306 273 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 GDI2P50395 445 aaKnown RBP10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 CLDN12P56749 244 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 NRG3P56975 720 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 KRT33BQ14525 404 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 HACD4Q5VWC8 232 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 FGD2Q7Z6J4 655 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 ASPGQ86U10 573 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 NRROSQ86YC3 692 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 TTLQ8NG68 377 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 OR56B4Q8NH76 319 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 WBP1Q96G27 269 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 MS4A4EQ96PG1 132 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 GFI1Q99684 422 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 ANKRD10Q9NXR5 420 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 PTTG3PQ9NZH4 202 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 RNF215Q9Y6U7 377 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 REV3LO60673 3130 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 TEX46H3BTG2 121 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 ARPC1BO15143 372 aaKnown RBP10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 FLRT2O43155 660 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 PCDH8O95206 1070 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 CLTBP09497 229 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 ZNF888P0CJ79 500 aaPredicted RBP10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 ATF4P18848 351 aaPredicted RBP10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 NT5EP21589 574 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 ITGB8P26012 769 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 RAD52P43351 418 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 ARFIP1P53367 373 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 RPS11P62280 158 aaKnown RBP eCLIP10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 TJAP1Q5JTD0 557 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 TCTE1Q5JU00 501 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 FIGNL1Q6PIW4 674 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 SEZ6L2Q6UXD5 910 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 SLC51BQ86UW2 128 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 RANBP3LQ86VV4 465 aaPredicted RBP10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 TMEFF1Q8IYR6 380 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 SDR9C7Q8NEX9 313 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 ZNF671Q8TAW3 534 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 ZCCHC10Q8TBK6 192 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 SMIM4Q8WVI0 70 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 ZNRF4Q8WWF5 429 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 PELI1Q96FA3 418 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 LINC00052Q96N35 136 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 SARGQ9BW04 601 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 HRASLSQ9HDD0 168 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 ADAP2Q9NPF8 381 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 KRCC1Q9NPI7 259 aaPredicted RBP10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 RDH8Q9NYR8 311 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 COPZ2Q9P299 210 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 KLK11Q9UBX7 282 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 NPFFR2Q9Y5X5 522 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 NPTNQ9Y639 398 aa10.84□□□□□ -0.67
PDZRN3-203ENST00000462146 IDSB3KWA1 339 aa10.83□□□□□ -0.68
PDZRN3-203ENST00000462146 TRIM77I1YAP6 450 aa10.83□□□□□ -0.68
PDZRN3-203ENST00000462146 PSMD9O00233 223 aa10.83□□□□□ -0.68
PDZRN3-203ENST00000462146 TSPAN4O14817 238 aa10.83□□□□□ -0.68
PDZRN3-203ENST00000462146 FKTNO75072 461 aa10.83□□□□□ -0.68
PDZRN3-203ENST00000462146 PEX14O75381 377 aa10.83□□□□□ -0.68
PDZRN3-203ENST00000462146 GATBO75879 557 aaKnown RBP10.83□□□□□ -0.68
PDZRN3-203ENST00000462146 LINC00271P0C7V0 271 aa10.83□□□□□ -0.68
PDZRN3-203ENST00000462146 UGT2B7P16662 529 aa10.83□□□□□ -0.68
PDZRN3-203ENST00000462146 CXCL2P19875 107 aa10.83□□□□□ -0.68
PDZRN3-203ENST00000462146 DDX6P26196 483 aaKnown RBP eCLIP10.83□□□□□ -0.68
PDZRN3-203ENST00000462146 PPM1AP35813 382 aa10.83□□□□□ -0.68
PDZRN3-203ENST00000462146 CCR9P51686 369 aa10.83□□□□□ -0.68
PDZRN3-203ENST00000462146 MAP2K6P52564 334 aa10.83□□□□□ -0.68
PDZRN3-203ENST00000462146 PITPNAQ00169 270 aa10.83□□□□□ -0.68
PDZRN3-203ENST00000462146 ARHGAP11BQ3KRB8 267 aa10.83□□□□□ -0.68
PDZRN3-203ENST00000462146 GARNL3Q5VVW2 1013 aa10.83□□□□□ -0.68
PDZRN3-203ENST00000462146 KIAA1324Q6UXG2 1013 aaKnown RBP10.83□□□□□ -0.68
PDZRN3-203ENST00000462146 OR2L8Q8NGY9 312 aa10.83□□□□□ -0.68
PDZRN3-203ENST00000462146 OR52I2Q8NH67 350 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms