RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 ZG16BQ96DA0 208 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 ZC3HAV1LQ96H79 300 aaKnown RBP8.14□□□□□ -1.11
BRCA1-207ENST00000461798 POM121Q96HA1 1249 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 C18orf12Q96KH6 178 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 TEX37Q96LM6 180 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 TRNT1Q96Q11 434 aaKnown RBP8.14□□□□□ -1.11
BRCA1-207ENST00000461798 PSD2Q9BQI7 771 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 ACTR6Q9GZN1 396 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 CENPHQ9H3R5 247 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 EXOSC3Q9NQT5 275 aaKnown RBP8.14□□□□□ -1.11
BRCA1-207ENST00000461798 SERINC1Q9NRX5 453 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 KLHL9Q9P2J3 617 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 MARCOQ9UEW3 520 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-207ENST00000461798 WDR45Q9Y484 360 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 ROS1P08922 2347 aa8.14□□□□□ -1.11
BRCA1-207ENST00000461798 ZNF469Q96JG9 3925 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-207ENST00000461798 IGKV3D-15A0A087WSY6 115 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 A0A1W2PNR3 127 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 TMEM120BA0PK00 339 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 CCDC154A6NI56 674 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 TRPC5OSA6NMA1 111 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 ZNF814B7Z6K7 855 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 J3QL48 77 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 SMAD9O15198 467 aaKnown RBP8.13□□□□□ -1.11
BRCA1-207ENST00000461798 DNPH1O43598 174 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 CNOT4O95628 575 aaKnown RBP8.13□□□□□ -1.11
BRCA1-207ENST00000461798 PGRP06401 933 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 UBTFL6P0CB48 400 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-207ENST00000461798 HOXB4P17483 251 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-207ENST00000461798 IL12AP29459 219 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 SLC7A1P30825 629 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 KHKP50053 298 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 CCR4P51679 360 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 CASP9P55211 416 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 KCNJ10P78508 379 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 PLAURQ03405 335 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 CHRNEQ04844 493 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 MERTKQ12866 999 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 ITGADQ13349 1161 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 C3orf33Q6P1S2 294 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 TNFAIP8L2Q6P589 184 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-207ENST00000461798 DNAJC14Q6Y2X3 702 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-207ENST00000461798 ZNF704Q6ZNC4 412 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-207ENST00000461798 LRRC74BQ6ZQY2 392 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 SSX8Q7RTT4 187 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 GRINAQ7Z429 371 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 MTDHQ86UE4 582 aaKnown RBP8.13□□□□□ -1.11
BRCA1-207ENST00000461798 RNF130Q86XS8 419 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 P3H2Q8IVL5 708 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 CMIPQ8IY22 773 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 TMCO5AQ8N6Q1 288 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 TRIML2Q8N7C3 387 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 ZNF611Q8N823 705 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 ATP6V1C2Q8NEY4 427 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 RFWD2Q8NHY2 731 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 HSD17B8Q92506 261 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 ZNF75CPQ92670 426 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-207ENST00000461798 S100PBPQ96BU1 408 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 MAELQ96JY0 434 aaKnown RBP8.13□□□□□ -1.11
BRCA1-207ENST00000461798 PAIP2Q9BPZ3 127 aaKnown RBP8.13□□□□□ -1.11
BRCA1-207ENST00000461798 SLC35A5Q9BS91 424 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 CCDC106Q9BWC9 280 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 GSX2Q9BZM3 304 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 QRSL1Q9H0R6 528 aaKnown RBP8.13□□□□□ -1.11
BRCA1-207ENST00000461798 GSX1Q9H4S2 264 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-207ENST00000461798 WDR55Q9H6Y2 383 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-207ENST00000461798 C12orf49Q9H741 205 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 MTHFD2LQ9H903 347 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-207ENST00000461798 UBTD1Q9HAC8 227 aa8.13□□□□□ -1.11
BRCA1-207ENST00000461798 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-207ENST00000461798 ZNF701Q9NV72 531 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-207ENST00000461798 SPIN1Q9Y657 262 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-207ENST00000461798 ARID1AO14497 2285 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 AGAP5A6NIR3 686 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 SULT2B1O00204 365 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 FAAHO00519 579 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 DIAPH2O60879 1101 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 BCAS1O75363 584 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-207ENST00000461798 CYP7B1O75881 506 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 PGM3O95394 542 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 ADAP00813 363 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 C1QCP02747 245 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 IL6P05231 212 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 INHBBP09529 407 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 ZCCHC18P0CG32 403 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 IDO1P14902 403 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 EPHA3P29320 983 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 CHI3L1P36222 383 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-207ENST00000461798 HTR3AP46098 478 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 DIO1P49895 249 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 ANXA11P50995 505 aaKnown RBP8.12□□□□□ -1.11
BRCA1-207ENST00000461798 MAP2K6P52564 334 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 CSNK2A1P68400 391 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-207ENST00000461798 RASGEF1BQ0VAM2 473 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 TAB1Q15750 504 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 PDCD4Q53EL6 469 aaKnown RBP8.12□□□□□ -1.11
BRCA1-207ENST00000461798 SYT14P1Q58G82 188 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 Q5PR19 223 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 ATG16L1Q676U5 607 aa8.12□□□□□ -1.11
BRCA1-207ENST00000461798 Q6ZT83 130 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms