RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 CARMIL3Q8ND23 1372 aa0.83□□□□□ -2.28
PTPN22-203ENST00000460620 DSTQ03001 7570 aaKnown RBP0.83□□□□□ -2.28
PTPN22-203ENST00000460620 NID2Q14112 1375 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 CCDC7Q96M83 1385 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 TRBV2A0A0J9YWF9 115 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 A0A1B0GUL7 405 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 C7orf66A4D0T2 115 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 TSPAN8P19075 237 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 ASMTP46597 345 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 KPNA2P52292 529 aaKnown RBP0.82□□□□□ -2.28
PTPN22-203ENST00000460620 EFNB2P52799 333 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 ATXN3P54252 364 aaPredicted RBP0.82□□□□□ -2.28
PTPN22-203ENST00000460620 OSTNP61366 133 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 SELENOTP62341 195 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 RGS1Q08116 209 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 GNMTQ14749 295 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 TMEM52BQ4KMG9 183 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 KLF17Q5JT82 389 aaPredicted RBP0.82□□□□□ -2.28
PTPN22-203ENST00000460620 C1orf100Q5SVJ3 147 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 SHISA6Q6ZSJ9 500 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 SVOPLQ8N434 492 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 TMCO5AQ8N6Q1 288 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 C15orf54Q8N8G6 183 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 BRSK1Q8TDC3 778 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 ST7LQ8TDW4 575 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 TIMD4Q96H15 378 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 TSG101Q99816 390 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 CRNKL1Q9BZJ0 848 aaKnown RBP0.82□□□□□ -2.28
PTPN22-203ENST00000460620 SIRPDQ9H106 197 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 LPAR2Q9HBW0 351 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 PRMT8Q9NR22 394 aaPredicted RBP0.82□□□□□ -2.28
PTPN22-203ENST00000460620 C1orf123Q9NWV4 160 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 UTP6Q9NYH9 597 aaKnown RBP0.82□□□□□ -2.28
PTPN22-203ENST00000460620 DEC1Q9P2X7 70 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 TRIM10Q9UDY6 481 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 OR12D3Q9UGF7 316 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 ZNF229Q9UJW7 825 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 TRAPPC4Q9Y296 219 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 COL27A1Q8IZC6 1860 aaPredicted RBP0.82□□□□□ -2.28
PTPN22-203ENST00000460620 IGSF9BQ9UPX0 1349 aa0.82□□□□□ -2.28
PTPN22-203ENST00000460620 CABIN1Q9Y6J0 2220 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 E9PBE3 544 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 RPL36A-HNRNPH2H7BZ11 118 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 SLC7A4O43246 635 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 PNPP00491 289 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 GSTT2P0CG29 244 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 GSTT2BP0CG30 244 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 ANXA3P12429 323 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 UQCRBP14927 111 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 NTHL1P78549 312 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 RIPPLY1Q0D2K3 151 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 LAGE3Q14657 143 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 IGFBP7Q16270 282 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 KRTAP6-3Q3LI67 103 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 FAM133BQ5BKY9 247 aaKnown RBP0.81□□□□□ -2.28
PTPN22-203ENST00000460620 FRMPD2BQ6IN97 320 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 FAHD2BQ6P2I3 314 aaPredicted RBP0.81□□□□□ -2.28
PTPN22-203ENST00000460620 TMEM26Q6ZUK4 368 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 ACOT7LQ6ZUV0 252 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 MFSD6LQ8IWD5 586 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 TMEM185AQ8NFB2 350 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 OR6C4Q8NGE1 309 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 OR52P1PQ8NH57 321 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 RAET1EQ8TD07 263 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 PAQR8Q8TEZ7 354 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 FAHD2AQ96GK7 314 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 ZNF560Q96MR9 790 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 GAL3ST1Q99999 423 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 ZNF586Q9NXT0 402 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 MRPL39Q9NYK5 338 aaKnown RBP0.81□□□□□ -2.28
PTPN22-203ENST00000460620 ZNF226Q9NYT6 803 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 HMG20BQ9P0W2 317 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 XPO7Q9UIA9 1087 aaKnown RBP0.81□□□□□ -2.28
PTPN22-203ENST00000460620 UBIAD1Q9Y5Z9 338 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 NLRC5Q86WI3 1866 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 PLEKHH1Q9ULM0 1364 aa0.81□□□□□ -2.28
PTPN22-203ENST00000460620 A0A1W2PRV1 198 aa0.8□□□□□ -2.28
PTPN22-203ENST00000460620 FCN1O00602 326 aa0.8□□□□□ -2.28
PTPN22-203ENST00000460620 JAK2O60674 1132 aa0.8□□□□□ -2.28
PTPN22-203ENST00000460620 UGT2B17O75795 530 aa0.8□□□□□ -2.28
PTPN22-203ENST00000460620 ANXA4P09525 319 aaPredicted RBP0.8□□□□□ -2.28
PTPN22-203ENST00000460620 GLULP15104 373 aa0.8□□□□□ -2.28
PTPN22-203ENST00000460620 CXCL5P42830 114 aa0.8□□□□□ -2.28
PTPN22-203ENST00000460620 SRP54P61011 504 aaKnown RBP0.8□□□□□ -2.28
PTPN22-203ENST00000460620 TGFBR3Q03167 851 aa0.8□□□□□ -2.28
PTPN22-203ENST00000460620 ZNF763Q0D2J5 394 aa0.8□□□□□ -2.28
PTPN22-203ENST00000460620 PPP2R5CQ13362 524 aa0.8□□□□□ -2.28
PTPN22-203ENST00000460620 SNX1Q13596 522 aa0.8□□□□□ -2.28
PTPN22-203ENST00000460620 TMEM183BQ1AE95 376 aa0.8□□□□□ -2.28
PTPN22-203ENST00000460620 ADPRMQ3LIE5 342 aa0.8□□□□□ -2.28
PTPN22-203ENST00000460620 TIGITQ495A1 244 aa0.8□□□□□ -2.28
PTPN22-203ENST00000460620 BOLA3Q53S33 107 aa0.8□□□□□ -2.28
PTPN22-203ENST00000460620 CTRB2Q6GPI1 263 aa0.8□□□□□ -2.28
PTPN22-203ENST00000460620 FAM199XQ6PEV8 388 aaPredicted RBP0.8□□□□□ -2.28
PTPN22-203ENST00000460620 SYT10Q6XYQ8 523 aa0.8□□□□□ -2.28
PTPN22-203ENST00000460620 LANCL3Q6ZV70 420 aa0.8□□□□□ -2.28
PTPN22-203ENST00000460620 TMEM183AQ8IXX5 376 aa0.8□□□□□ -2.28
PTPN22-203ENST00000460620 FAM86B1Q8N7N1 296 aa0.8□□□□□ -2.28
PTPN22-203ENST00000460620 OR10G9Q8NGN4 311 aa0.8□□□□□ -2.28
PTPN22-203ENST00000460620 ACER1Q8TDN7 264 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms