RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 INPP5EQ9NRR6 644 aa14.36□□□□□ -0.11
SSR4-206ENST00000460616 FBXL3Q9UKT7 428 aa14.36□□□□□ -0.11
SSR4-206ENST00000460616 NTNG1Q9Y2I2 539 aa14.36□□□□□ -0.11
SSR4-206ENST00000460616 C2orf16Q68DN1 1984 aa14.36□□□□□ -0.11
SSR4-206ENST00000460616 NOTCH4Q99466 2003 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 FXYD6-FXYD2A0A087WZ82 144 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 SIGLEC5O15389 551 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 MRPL3P09001 348 aaKnown RBP14.35□□□□□ -0.11
SSR4-206ENST00000460616 TYRP1P17643 537 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 PTGER1P34995 402 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 SIGLEC14Q08ET2 396 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 LASP1Q14847 261 aaKnown RBP14.35□□□□□ -0.11
SSR4-206ENST00000460616 UBXN2BQ14CS0 331 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 MLC1Q15049 377 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 PRPF38BQ5VTL8 546 aaKnown RBP14.35□□□□□ -0.11
SSR4-206ENST00000460616 ZNF660Q6AZW8 331 aaPredicted RBP14.35□□□□□ -0.11
SSR4-206ENST00000460616 GDPD4Q6W3E5 623 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 MBOAT2Q6ZWT7 520 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 TRMT11Q7Z4G4 463 aaKnown RBP14.35□□□□□ -0.11
SSR4-206ENST00000460616 PAQR7Q86WK9 346 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 LGALS14Q8TCE9 139 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 SETD7Q8WTS6 366 aaKnown RBP14.35□□□□□ -0.11
SSR4-206ENST00000460616 TMEM255BQ8WV15 326 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 GLYATL1Q969I3 302 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 PNPLA2Q96AD5 504 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 AMDHD1Q96NU7 426 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 ARHGDIGQ99819 225 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 FXYD6Q9H0Q3 95 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 ZNF576Q9H609 170 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 ZNF304Q9HCX3 659 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 ZNF334Q9HCZ1 680 aaPredicted RBP14.35□□□□□ -0.11
SSR4-206ENST00000460616 KLK11Q9UBX7 282 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 AK6Q9Y3D8 172 aaKnown RBP14.35□□□□□ -0.11
SSR4-206ENST00000460616 PCDHGA9Q9Y5G4 932 aaKnown RBP14.35□□□□□ -0.11
SSR4-206ENST00000460616 HCFC2Q9Y5Z7 792 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 SNRPGP15A8MWD9 76 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 GABARAPH6UMI1 98 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 H7C2Y5 167 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 SYT5O00445 386 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 TMPRSS11DO60235 418 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 PTNP21246 168 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 PYCR1P32322 319 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 ANXA11P50995 505 aaKnown RBP14.35□□□□□ -0.11
SSR4-206ENST00000460616 PRAMEF14Q5SWL7 426 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 PRAMEF13Q5VWM6 474 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 DMKNQ6E0U4 476 aaPredicted RBP14.35□□□□□ -0.11
SSR4-206ENST00000460616 FAM129CQ86XR2 697 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 VN1R2Q8NFZ6 395 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 FCAMRQ8WWV6 532 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.35□□□□□ -0.11
SSR4-206ENST00000460616 EXOSC3Q9NQT5 275 aaKnown RBP14.35□□□□□ -0.11
SSR4-206ENST00000460616 KLHL9Q9P2J3 617 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 PURGQ9UJV8 347 aaKnown RBP14.35□□□□□ -0.11
SSR4-206ENST00000460616 PCDHGA5Q9Y5G8 931 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 KCNE3Q9Y6H6 103 aa14.35□□□□□ -0.11
SSR4-206ENST00000460616 CCL16O15467 120 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 SERPINA3P01011 423 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 HMGN2P05204 90 aaKnown RBP14.34□□□□□ -0.11
SSR4-206ENST00000460616 NCBP2P52298 156 aaKnown RBP eCLIP14.34□□□□□ -0.117e-8■□□□□ 8.7
SSR4-206ENST00000460616 ARHGDIBP52566 201 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 SCRN3Q0VDG4 424 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 HDDC3Q8N4P3 179 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 SMAP2Q8WU79 429 aaPredicted RBP14.34□□□□□ -0.11
SSR4-206ENST00000460616 KISS1RQ969F8 398 aaPredicted RBP14.34□□□□□ -0.11
SSR4-206ENST00000460616 TEAD3Q99594 435 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 HCFC1R1Q9NWW0 138 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 ARL6IP5O75915 188 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 KRT33AO76009 404 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 IL5P05113 134 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 ZGLP1P0C6A0 271 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 DLX5P56178 289 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 OC90Q02509 493 aaPredicted RBP14.34□□□□□ -0.11
SSR4-206ENST00000460616 MELKQ14680 651 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 LINC00303Q3SY05 128 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 TXNDC8Q6A555 127 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 GDF7Q7Z4P5 450 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 LRRTM4Q86VH4 590 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 PXT1Q8NFP0 134 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 OR5J2Q8NH18 312 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 IL17FQ96PD4 163 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 C1QTNF2Q9BXJ5 285 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 MS4A8Q9BY19 250 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 NKX6-2Q9C056 277 aaPredicted RBP14.34□□□□□ -0.11
SSR4-206ENST00000460616 OR51V1Q9H2C8 321 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 OPN4Q9UHM6 478 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 HS3ST2Q9Y278 367 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 SLC6A5Q9Y345 797 aa14.34□□□□□ -0.11
SSR4-206ENST00000460616 PRUNE2Q8WUY3 3088 aa14.33□□□□□ -0.12
SSR4-206ENST00000460616 CDHR4A6H8M9 788 aa14.33□□□□□ -0.12
SSR4-206ENST00000460616 ANTXRLA6NF34 631 aa14.33□□□□□ -0.12
SSR4-206ENST00000460616 SPDEFO95238 335 aa14.33□□□□□ -0.12
SSR4-206ENST00000460616 THY1P04216 161 aa14.33□□□□□ -0.12
SSR4-206ENST00000460616 PRG2P13727 222 aa14.33□□□□□ -0.12
SSR4-206ENST00000460616 GPR85P60893 370 aa14.33□□□□□ -0.12
SSR4-206ENST00000460616 TGM3Q08188 693 aa14.33□□□□□ -0.12
SSR4-206ENST00000460616 FGL1Q08830 312 aa14.33□□□□□ -0.12
SSR4-206ENST00000460616 FAAP20Q6NZ36 180 aa14.33□□□□□ -0.12
SSR4-206ENST00000460616 Q6ZVU0 165 aa14.33□□□□□ -0.12
SSR4-206ENST00000460616 BRIX1Q8TDN6 353 aaKnown RBP14.33□□□□□ -0.12
SSR4-206ENST00000460616 C16orf58Q96GQ5 468 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms