RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 PNO1Q9NRX1 252 aaKnown RBP14.29□□□□□ -0.12
LMNB1-203ENST00000460265 ZNF443Q9Y2A4 671 aaPredicted RBP14.29□□□□□ -0.12
LMNB1-203ENST00000460265 LRRK1Q38SD2 2015 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 OR5K4A6NMS3 321 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 SOCS6O14544 535 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 RRASP10301 218 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 ERGP11308 486 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 TUSC1Q2TAM9 212 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 PRPF38BQ5VTL8 546 aaKnown RBP14.29□□□□□ -0.12
LMNB1-203ENST00000460265 MEDAGQ5VYS4 303 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 OR52R1Q8NGF1 315 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 FANK1Q8TC84 345 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 UPRTQ96BW1 309 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 C12orf57Q99622 126 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 HDHD2Q9H0R4 259 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 TMEM74BQ9NUR3 256 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 COPS3Q9UNS2 423 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 MRPS33Q9Y291 106 aaKnown RBP14.29□□□□□ -0.12
LMNB1-203ENST00000460265 CENPVL1A0A0U1RR11 272 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 J3QLW9 94 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 SOX30O94993 753 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 RECKO95980 971 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 ST6GAL1P15907 406 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 ZNF19P17023 458 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 ZNF273Q14593 569 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 LURAP1LQ8IV03 231 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 GJD3Q8N144 294 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 LINC00471Q8N535 108 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 ZDHHC1Q8WTX9 485 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 OPALINQ96PE5 141 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 FBXL21Q9UKT6 434 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 MED31Q9Y3C7 131 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 MAB21L2Q9Y586 359 aa14.29□□□□□ -0.12
LMNB1-203ENST00000460265 CLDN4O14493 209 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 PRODHO43272 600 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 BMP8BP34820 402 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 CLLU1Q5K131 121 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 CXXC5Q7LFL8 322 aaKnown RBP14.28□□□□□ -0.12
LMNB1-203ENST00000460265 BMP8AQ7Z5Y6 402 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 OAFQ86UD1 273 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 GPALPP1Q8IXQ4 340 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 PFN4Q8NHR9 129 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 GPR137Q96N19 417 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 SDF2Q99470 211 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 RSPO3Q9BXY4 272 aaPredicted RBP14.28□□□□□ -0.12
LMNB1-203ENST00000460265 STUB1Q9UNE7 303 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 DPM1O60762 260 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 NCR1O76036 304 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 UBXN7O94888 489 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 HBQ1P09105 142 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 GABRG2P18507 467 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 ITPKBP27987 946 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 WNT4P56705 351 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 ZIC1Q15915 447 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 SSX1Q16384 188 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 COL28A1Q2UY09 1125 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 GXYLT1Q4G148 440 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 OR6K6Q8NGW6 343 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 SEC22CQ9BRL7 303 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 GTPBP1O00178 669 aaKnown RBP14.28□□□□□ -0.12
LMNB1-203ENST00000460265 CHST10O43529 356 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 GPR75O95800 540 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 TPOP07202 933 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 ACVR1BP36896 505 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 RPS25P62851 125 aaKnown RBP14.28□□□□□ -0.12
LMNB1-203ENST00000460265 CRYZQ08257 329 aaKnown RBP14.28□□□□□ -0.12
LMNB1-203ENST00000460265 FUT5Q11128 374 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 MAPK14Q16539 360 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 GLYR1Q49A26 553 aaPredicted RBP14.28□□□□□ -0.12
LMNB1-203ENST00000460265 EIPR1Q53HC9 387 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 BICRALQ6AI39 1079 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 GPR139Q6DWJ6 353 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 DNAJC5GQ8N7S2 189 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 PROKR2Q8NFJ6 384 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 SFXN5Q8TD22 340 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 OR2A5Q96R48 311 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 OR8D2Q9GZM6 311 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 PIGUQ9H490 435 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 HHATLQ9HCP6 504 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 CLEC1BQ9P126 229 aa14.28□□□□□ -0.12
LMNB1-203ENST00000460265 A0A1W2PPL8 197 aa14.27□□□□□ -0.12
LMNB1-203ENST00000460265 APBB3O95704 486 aa14.27□□□□□ -0.12
LMNB1-203ENST00000460265 AGR2O95994 175 aa14.27□□□□□ -0.12
LMNB1-203ENST00000460265 SOX18P35713 384 aa14.27□□□□□ -0.12
LMNB1-203ENST00000460265 HSF2Q03933 536 aa14.27□□□□□ -0.12
LMNB1-203ENST00000460265 TSPAN31Q12999 210 aa14.27□□□□□ -0.12
LMNB1-203ENST00000460265 BAMBIQ13145 260 aa14.27□□□□□ -0.12
LMNB1-203ENST00000460265 IDNKQ5T6J7 187 aa14.27□□□□□ -0.12
LMNB1-203ENST00000460265 ZNF425Q6IV72 752 aa14.27□□□□□ -0.12
LMNB1-203ENST00000460265 TMEM64Q6YI46 380 aa14.27□□□□□ -0.12
LMNB1-203ENST00000460265 OR52H1Q8NGJ2 320 aa14.27□□□□□ -0.12
LMNB1-203ENST00000460265 CDCA4Q9BXL8 241 aa14.27□□□□□ -0.12
LMNB1-203ENST00000460265 GSX2Q9BZM3 304 aa14.27□□□□□ -0.12
LMNB1-203ENST00000460265 OR52D1Q9H346 318 aa14.27□□□□□ -0.12
LMNB1-203ENST00000460265 PPIEQ9UNP9 301 aaKnown RBP14.27□□□□□ -0.12
LMNB1-203ENST00000460265 TRANK1O15050 2925 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 RIIAD1A6NNX1 92 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 GMDSO60547 372 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 SLC43A1O75387 559 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 ZNF254O75437 659 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms