RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 RBM14Q96PK6 669 aaKnown RBP4.04□□□□□ -1.76
CCDC50-203ENST00000460064 IL4I1Q96RQ9 567 aa4.04□□□□□ -1.76
CCDC50-203ENST00000460064 NPAS2Q99743 824 aa4.04□□□□□ -1.76
CCDC50-203ENST00000460064 SRXN1Q9BYN0 137 aa4.04□□□□□ -1.76
CCDC50-203ENST00000460064 LRRN3Q9H3W5 708 aa4.04□□□□□ -1.76
CCDC50-203ENST00000460064 VNN3Q9NY84 501 aa4.04□□□□□ -1.76
CCDC50-203ENST00000460064 CDH9Q9ULB4 789 aa4.04□□□□□ -1.76
CCDC50-203ENST00000460064 CA5BQ9Y2D0 317 aa4.04□□□□□ -1.76
CCDC50-203ENST00000460064 FRMPD3Q5JV73 1810 aa4.04□□□□□ -1.76
CCDC50-203ENST00000460064 KLF18A0A0U1RQI7 1052 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 PCP4L1A6NKN8 68 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 TNFSF11O14788 317 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 OR10H3O60404 316 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 LALBAP00709 142 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 P0C879 139 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 DBTP11182 482 aaKnown RBP4.03□□□□□ -1.76
CCDC50-203ENST00000460064 KLK2P20151 261 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 HMGB2P26583 209 aaKnown RBP4.03□□□□□ -1.76
CCDC50-203ENST00000460064 ANXA13P27216 316 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 GCAP28676 217 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 NTSP30990 170 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 GRIA1P42261 906 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 DAP3P51398 398 aaKnown RBP4.03□□□□□ -1.76
CCDC50-203ENST00000460064 CHRNB3Q05901 458 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 DPYSL2Q16555 572 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 CFAP221Q4G0U5 840 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 Q6ZPB1 254 aaPredicted RBP4.03□□□□□ -1.76
CCDC50-203ENST00000460064 NLRP9Q7RTR0 991 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 C17orf82Q86X59 251 aaPredicted RBP4.03□□□□□ -1.76
CCDC50-203ENST00000460064 CCDC65Q8IXS2 484 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 SLC35F2Q8IXU6 374 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 BHLHE23Q8NDY6 225 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 GIMAP1Q8WWP7 306 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 RAPGEF5Q92565 580 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 SLC41A3Q96GZ6 507 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 GON7Q9BXV9 100 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 CAPS2Q9BXY5 557 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 ISG20L2Q9H9L3 353 aaKnown RBP4.03□□□□□ -1.76
CCDC50-203ENST00000460064 POPDC2Q9HBU9 364 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 TNFRSF19Q9NS68 423 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 SMOXQ9NWM0 555 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 HOXC10Q9NYD6 342 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 COX16Q9P0S2 106 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 PHF11Q9UIL8 331 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 UBQLN1Q9UMX0 589 aaKnown RBP4.03□□□□□ -1.76
CCDC50-203ENST00000460064 TIMM10BQ9Y5J6 103 aa4.03□□□□□ -1.76
CCDC50-203ENST00000460064 TUBAL3A6NHL2 446 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 VSTM2BA6NLU5 285 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 POLR2DO15514 142 aaKnown RBP4.02□□□□□ -1.77
CCDC50-203ENST00000460064 ECI2O75521 394 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 LYPLA1O75608 230 aaPredicted RBP4.02□□□□□ -1.77
CCDC50-203ENST00000460064 SSR1P43307 286 aaKnown RBP4.02□□□□□ -1.77
CCDC50-203ENST00000460064 CASP4P49662 377 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 SLC26A2P50443 739 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 PLK1P53350 603 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 DIO3P55073 304 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 CCDC173Q0VFZ6 552 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 TMED1Q13445 227 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 ELAVL3Q14576 367 aaKnown RBP4.02□□□□□ -1.77
CCDC50-203ENST00000460064 ZMYND11Q15326 602 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 OR4F3Q6IEY1 312 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 OTUD6AQ7L8S5 288 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 EFL1Q7Z2Z2 1120 aaKnown RBP4.02□□□□□ -1.77
CCDC50-203ENST00000460064 SVOPLQ8N434 492 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 OR5D13Q8NGL4 314 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 ANKRD49Q8WVL7 239 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 NEIL2Q969S2 332 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 COQ2Q96H96 371 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 RPRD1AQ96P16 312 aaPredicted RBP4.02□□□□□ -1.77
CCDC50-203ENST00000460064 SECISBP2Q96T21 854 aaKnown RBP4.02□□□□□ -1.77
CCDC50-203ENST00000460064 ZBTB18Q99592 522 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 ZNF184Q99676 751 aaPredicted RBP4.02□□□□□ -1.77
CCDC50-203ENST00000460064 MAPKAP1Q9BPZ7 522 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 ZNF670Q9BS34 389 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 NMUR2Q9GZQ4 415 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 MAGT1Q9H0U3 335 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 PTGES2Q9H7Z7 377 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 POLE4Q9NR33 117 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 NUDT15Q9NV35 164 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 ONECUT1Q9UBC0 465 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 PRPF19Q9UMS4 504 aaKnown RBP4.02□□□□□ -1.77
CCDC50-203ENST00000460064 POLDIP2Q9Y2S7 368 aa4.02□□□□□ -1.77
CCDC50-203ENST00000460064 RPAP1Q9BWH6 1393 aaPredicted RBP4.02□□□□□ -1.77
CCDC50-203ENST00000460064 ATP10AO60312 1499 aa4.01□□□□□ -1.77
CCDC50-203ENST00000460064 A0A1B0GUS0 222 aa4.01□□□□□ -1.77
CCDC50-203ENST00000460064 CXCL13O43927 109 aa4.01□□□□□ -1.77
CCDC50-203ENST00000460064 SLITRK3O94933 977 aa4.01□□□□□ -1.77
CCDC50-203ENST00000460064 SFTPCP11686 197 aa4.01□□□□□ -1.77
CCDC50-203ENST00000460064 RPS2P15880 293 aaKnown RBP4.01□□□□□ -1.77
CCDC50-203ENST00000460064 NCK1P16333 377 aa4.01□□□□□ -1.77
CCDC50-203ENST00000460064 PSMB1P20618 241 aaKnown RBP4.01□□□□□ -1.77
CCDC50-203ENST00000460064 RDXP35241 583 aaKnown RBP4.01□□□□□ -1.77
CCDC50-203ENST00000460064 RPL13AP40429 203 aaKnown RBP4.01□□□□□ -1.77
CCDC50-203ENST00000460064 LEPP41159 167 aa4.01□□□□□ -1.77
CCDC50-203ENST00000460064 CEBPDP49716 269 aaPredicted RBP4.01□□□□□ -1.77
CCDC50-203ENST00000460064 HNRNPA3P51991 378 aaKnown RBP4.01□□□□□ -1.77
CCDC50-203ENST00000460064 LRRC74AQ0VAA2 488 aa4.01□□□□□ -1.77
CCDC50-203ENST00000460064 ISXQ2M1V0 245 aa4.01□□□□□ -1.77
CCDC50-203ENST00000460064 TFAP2EQ6VUC0 442 aa4.01□□□□□ -1.77
CCDC50-203ENST00000460064 OR10H4Q8NGA5 316 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms