RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 NAP1L6A6NFF2 107 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 FAM183AA6NL82 134 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 LRRN3E7EW58 273 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 PEX12O00623 359 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 GSTZ1O43708 216 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-202ENST00000459727 CTNSO60931 367 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 ECDO95905 644 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-202ENST00000459727 IGLV3-19P01714 112 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 FAM157BP0CG42 384 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 MYOGP15173 224 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 ARSBP15848 533 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 TYRP1P17643 537 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 ELK1P19419 428 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 C4BPBP20851 252 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 STOMP27105 288 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 PTGER1P34995 402 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 GZMKP49863 264 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 MMP15P51511 669 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 CLDN2P57739 230 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 IGLV3-21P80748 117 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-202ENST00000459727 MGAT2Q10469 447 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 STX4Q12846 297 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 FAPQ12884 760 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 DYRK1AQ13627 763 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 CCINQ13939 588 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 FAM53BQ14153 422 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 CRMP1Q14194 572 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.16□□□□□ -1.1
HDAC3-202ENST00000459727 CDONQ4KMG0 1287 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 ACSM3Q53FZ2 586 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 YIF1BQ5BJH7 314 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 EMC4Q5J8M3 183 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 CCNJQ5T5M9 372 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 C2orf16Q68DN1 1984 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 LINC00114Q6XXX2 140 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 ZNF782Q6ZMW2 699 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-202ENST00000459727 CREB3L2Q70SY1 520 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 FAM220AQ7Z4H9 259 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 LUZP2Q86TE4 346 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 LRRC17Q8N6Y2 441 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 TMEM99Q8N816 258 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 SAMD12Q8N8I0 201 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 FAM98AQ8NCA5 519 aaKnown RBP8.16□□□□□ -1.1
HDAC3-202ENST00000459727 OR7G1Q8NGA0 311 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 OR52R1Q8NGF1 315 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 OR14A16Q8NHC5 309 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 TRMT10AQ8TBZ6 339 aaKnown RBP8.16□□□□□ -1.1
HDAC3-202ENST00000459727 FGF14Q92915 247 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 RIT1Q92963 219 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 TSACCQ96A04 125 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-202ENST00000459727 RNF170Q96K19 258 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 DGAT2Q96PD7 388 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 OR2M2Q96R28 347 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 TMEM246Q9BRR3 403 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 THAP7Q9BT49 309 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-202ENST00000459727 WACQ9BTA9 647 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 PRR14Q9BWN1 585 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-202ENST00000459727 SLITRK2Q9H156 845 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 OR51V1Q9H2C8 321 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 PRO3102Q9H379 93 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 LRRN3Q9H3W5 708 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 ZCCHC4Q9H5U6 513 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 C6orf106Q9H6K1 298 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-202ENST00000459727 RANBP3Q9H6Z4 567 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-202ENST00000459727 C12orf10Q9HB07 376 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 EXOSC3Q9NQT5 275 aaKnown RBP8.16□□□□□ -1.1
HDAC3-202ENST00000459727 HRASLS2Q9NWW9 162 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 DNAJB12Q9NXW2 375 aaKnown RBP8.16□□□□□ -1.1
HDAC3-202ENST00000459727 EPHA6Q9UF33 1036 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 NUFIP1Q9UHK0 495 aaKnown RBP8.16□□□□□ -1.1
HDAC3-202ENST00000459727 POMT2Q9UKY4 750 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 ICAM5Q9UMF0 924 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 MOKQ9UQ07 419 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 CAMK2AQ9UQM7 478 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 COLQQ9Y215 455 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-202ENST00000459727 NTNG1Q9Y2I2 539 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 ALG5Q9Y673 324 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 CACNG2Q9Y698 323 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 RNF215Q9Y6U7 377 aa8.16□□□□□ -1.1
HDAC3-202ENST00000459727 A0A087WUJ7 227 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 LOC105369274A0A096LPK9 316 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 LOC102723532A0A0G2JNH3 316 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 A0A1B0GVI7 797 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 C2orf92A0A1B0GVN3 265 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 C7orf66A4D0T2 115 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 OR6C70A6NIJ9 312 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 J3QLW9 94 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 PHYHO14832 338 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 SULT1B1O43704 296 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 PRAF2O60831 178 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 LDB3O75112 727 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 REM1O75628 298 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 OR7A10O76100 309 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 NSA2O95478 260 aaKnown RBP8.15□□□□□ -1.1
HDAC3-202ENST00000459727 SLC2A10O95528 541 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 PPP1R3DO95685 299 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 SEMA4FO95754 770 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 EML2O95834 649 aa8.15□□□□□ -1.1
HDAC3-202ENST00000459727 CBX7O95931 251 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms