RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 ELK4P28324 431 aa11.6□□□□□ -0.55
SNHG17-208ENST00000456953 MAPK1P28482 360 aa11.6□□□□□ -0.55
SNHG17-208ENST00000456953 EPHA3P29320 983 aa11.6□□□□□ -0.55
SNHG17-208ENST00000456953 SFTPDP35247 375 aa11.6□□□□□ -0.55
SNHG17-208ENST00000456953 EIF1P41567 113 aaKnown RBP11.6□□□□□ -0.55
SNHG17-208ENST00000456953 PDLIM4P50479 330 aa11.6□□□□□ -0.55
SNHG17-208ENST00000456953 CHRNB3Q05901 458 aa11.6□□□□□ -0.55
SNHG17-208ENST00000456953 FAM174BQ3ZCQ3 159 aa11.6□□□□□ -0.55
SNHG17-208ENST00000456953 SLC9B1Q4ZJI4 515 aa11.6□□□□□ -0.55
SNHG17-208ENST00000456953 KLHL17Q6TDP4 642 aa11.6□□□□□ -0.55
SNHG17-208ENST00000456953 TMEM107Q6UX40 140 aa11.6□□□□□ -0.55
SNHG17-208ENST00000456953 OR2L13Q8N349 312 aa11.6□□□□□ -0.55
SNHG17-208ENST00000456953 FNDC5Q8NAU1 212 aa11.6□□□□□ -0.55
SNHG17-208ENST00000456953 POC1BQ8TC44 478 aa11.6□□□□□ -0.55
SNHG17-208ENST00000456953 ZFAND2BQ8WV99 257 aa11.6□□□□□ -0.55
SNHG17-208ENST00000456953 METTL2AQ96IZ6 378 aaKnown RBP11.6□□□□□ -0.55
SNHG17-208ENST00000456953 ELAC2Q9BQ52 826 aaKnown RBP11.6□□□□□ -0.55
SNHG17-208ENST00000456953 LMF2Q9BU23 707 aaKnown RBP11.6□□□□□ -0.55
SNHG17-208ENST00000456953 EBPLQ9BY08 206 aa11.6□□□□□ -0.55
SNHG17-208ENST00000456953 RABEP2Q9H5N1 569 aa11.6□□□□□ -0.55
SNHG17-208ENST00000456953 BCO1Q9HAY6 547 aa11.6□□□□□ -0.55
SNHG17-208ENST00000456953 DDX18Q9NVP1 670 aaKnown RBP11.6□□□□□ -0.55
SNHG17-208ENST00000456953 KLHL9Q9P2J3 617 aa11.6□□□□□ -0.55
SNHG17-208ENST00000456953 GIMAP2Q9UG22 337 aa11.6□□□□□ -0.55
SNHG17-208ENST00000456953 PMF1-BGLAPU3KQ54 211 aa11.6□□□□□ -0.55
SNHG17-208ENST00000456953 IGHV4-61A0A0C4DH41 118 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 TTC36A6NLP5 189 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 GJE1A6NN92 205 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 MYO1GB0I1T2 1018 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 NPIPB8E9PQR5 432 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 UPK1AO00322 258 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 ZNF195O14628 629 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 IGKV1D-16P01601 117 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 DRD4P21917 467 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 CD40P25942 277 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 SHC1P29353 583 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 NCBP2P52298 156 aaKnown RBP eCLIP11.59□□□□□ -0.55
SNHG17-208ENST00000456953 ARFIP2P53365 341 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 SPOCK1Q08629 439 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 MAD2L1Q13257 205 aaPredicted RBP11.59□□□□□ -0.55
SNHG17-208ENST00000456953 RFTN2Q52LD8 501 aaPredicted RBP11.59□□□□□ -0.55
SNHG17-208ENST00000456953 C6orf136Q5SQH8 315 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 B3GLCTQ6Y288 498 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 SPATA21Q7Z572 469 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 OR4C3Q8NH37 302 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 CEP70Q8NHQ1 597 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 FAM110BQ8TC76 370 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 C3orf49Q96BT1 292 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 INPP5KQ9BT40 448 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 CCDC28BQ9BUN5 200 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 TMEM120AQ9BXJ8 343 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 TCF7L2Q9NQB0 619 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 KLHL14Q9P2G3 628 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 PRSS50Q9UI38 385 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 TMED5Q9Y3A6 229 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 POLR3HQ9Y535 204 aaPredicted RBP11.59□□□□□ -0.55
SNHG17-208ENST00000456953 FKBP7Q9Y680 259 aa11.59□□□□□ -0.55
SNHG17-208ENST00000456953 SHOX2O60902 331 aaPredicted RBP11.58□□□□□ -0.56
SNHG17-208ENST00000456953 OXSR1O95747 527 aaPredicted RBP11.58□□□□□ -0.56
SNHG17-208ENST00000456953 ANXA4P09525 319 aaPredicted RBP11.58□□□□□ -0.56
SNHG17-208ENST00000456953 LINGO3P0C6S8 592 aa11.58□□□□□ -0.56
SNHG17-208ENST00000456953 IGHV1-2P23083 117 aa11.58□□□□□ -0.56
SNHG17-208ENST00000456953 TIA1P31483 386 aaKnown RBP eCLIP11.58□□□□□ -0.56
SNHG17-208ENST00000456953 GABRA3P34903 492 aa11.58□□□□□ -0.56
SNHG17-208ENST00000456953 SRP14P37108 136 aaKnown RBP11.58□□□□□ -0.56
SNHG17-208ENST00000456953 ZNF83P51522 516 aa11.58□□□□□ -0.56
SNHG17-208ENST00000456953 RAE1P78406 368 aaKnown RBP11.58□□□□□ -0.56
SNHG17-208ENST00000456953 EMX2Q04743 252 aa11.58□□□□□ -0.56
SNHG17-208ENST00000456953 IL23RQ5VWK5 629 aa11.58□□□□□ -0.56
SNHG17-208ENST00000456953 CGB2Q6NT52 195 aa11.58□□□□□ -0.56
SNHG17-208ENST00000456953 NOXRED1Q6NXP6 359 aa11.58□□□□□ -0.56
SNHG17-208ENST00000456953 GALNT18Q6P9A2 607 aa11.58□□□□□ -0.56
SNHG17-208ENST00000456953 SPATA19Q7Z5L4 167 aa11.58□□□□□ -0.56
SNHG17-208ENST00000456953 MISPQ8IVT2 679 aa11.58□□□□□ -0.56
SNHG17-208ENST00000456953 GATSQ8NAP1 163 aa11.58□□□□□ -0.56
SNHG17-208ENST00000456953 CDC26Q8NHZ8 85 aa11.58□□□□□ -0.56
SNHG17-208ENST00000456953 C16orf78Q8WTQ4 265 aa11.58□□□□□ -0.56
SNHG17-208ENST00000456953 MAELQ96JY0 434 aaKnown RBP11.58□□□□□ -0.56
SNHG17-208ENST00000456953 OR52B2Q96RD2 323 aa11.58□□□□□ -0.56
SNHG17-208ENST00000456953 EBF4Q9BQW3 602 aa11.58□□□□□ -0.56
SNHG17-208ENST00000456953 C1orf50Q9BV19 199 aa11.58□□□□□ -0.56
SNHG17-208ENST00000456953 CXorf36Q9H7Y0 433 aa11.58□□□□□ -0.56
SNHG17-208ENST00000456953 MYNNQ9NPC7 610 aa11.58□□□□□ -0.56
SNHG17-208ENST00000456953 NOP53Q9NZM5 478 aaKnown RBP11.58□□□□□ -0.56
SNHG17-208ENST00000456953 ING1Q9UK53 422 aaPredicted RBP11.58□□□□□ -0.56
SNHG17-208ENST00000456953 A0A0A6YYJ9 748 aa11.57□□□□□ -0.56
SNHG17-208ENST00000456953 LOC390937A0A1W2PQ73 354 aa11.57□□□□□ -0.56
SNHG17-208ENST00000456953 GXYLT2A0PJZ3 443 aa11.57□□□□□ -0.56
SNHG17-208ENST00000456953 E9PBE3 544 aa11.57□□□□□ -0.56
SNHG17-208ENST00000456953 SMAD9O15198 467 aaKnown RBP11.57□□□□□ -0.56
SNHG17-208ENST00000456953 UBDO15205 165 aa11.57□□□□□ -0.56
SNHG17-208ENST00000456953 ZNF23P17027 643 aa11.57□□□□□ -0.56
SNHG17-208ENST00000456953 DDCP20711 480 aa11.57□□□□□ -0.56
SNHG17-208ENST00000456953 ENPP1P22413 925 aa11.57□□□□□ -0.56
SNHG17-208ENST00000456953 GSTM5P46439 218 aa11.57□□□□□ -0.56
SNHG17-208ENST00000456953 COMPP49747 757 aaPredicted RBP11.57□□□□□ -0.56
SNHG17-208ENST00000456953 ZNF763Q0D2J5 394 aa11.57□□□□□ -0.56
SNHG17-208ENST00000456953 FOXF1Q12946 379 aa11.57□□□□□ -0.56
SNHG17-208ENST00000456953 KIAA0040Q15053 153 aa11.57□□□□□ -0.56
SNHG17-208ENST00000456953 SMU1Q2TAY7 513 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms