RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 UBL7Q96S82 380 aaPredicted RBP9.97□□□□□ -0.81
SCN9A-205ENST00000454569 GPA33Q99795 319 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 BDH2Q9BUT1 245 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 ADAM19Q9H013 955 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 REEP1Q9H902 201 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 PKD1L2Q7Z442 2459 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 IGKV1D-42A0A075B6H8 117 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 A0A1W2PRQ8 180 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 SH3PXD2BA1X283 911 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 ANKUB1A6NFN9 424 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 DLGAP1O14490 977 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 ZIC3O60481 467 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 DPM1O60762 260 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 MITFO75030 526 aaPredicted RBP9.96□□□□□ -0.82
SCN9A-205ENST00000454569 OR5F1O95221 314 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 CELA3AP09093 270 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 PRKCAP17252 672 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 FUT1P19526 365 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 CCNA2P20248 432 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 FPR1P21462 350 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 TACR3P29371 465 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 DNAJA1P31689 397 aaKnown RBP9.96□□□□□ -0.82
SCN9A-205ENST00000454569 DAPP51397 102 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 TMPRSS3P57727 454 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 GTF3C1Q12789 2109 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 DGCR6Q14129 220 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 ZSWIM7Q19AV6 140 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 FGD3Q5JSP0 725 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 COLEC12Q5KU26 742 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 RNFT1Q5M7Z0 435 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 BROXQ5VW32 411 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 TIGD3Q6B0B8 471 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 SLC25A25Q6KCM7 469 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 POMZP3Q6PJE2 187 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 ATG4DQ86TL0 474 aaPredicted RBP9.96□□□□□ -0.82
SCN9A-205ENST00000454569 STK32CQ86UX6 486 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 CYP4Z1Q86W10 505 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 PLCZ1Q86YW0 608 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 MISPQ8IVT2 679 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 ZNF440Q8IYI8 595 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 GALNT4Q8N4A0 578 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 CBR4Q8N4T8 237 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 OR2M7Q8NG81 312 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 OR5K1Q8NHB7 308 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 PFN4Q8NHR9 129 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 ZNF563Q8TA94 476 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 SCMH1Q96GD3 660 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 ABHD17AQ96GS6 310 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 TMEM41AQ96HV5 264 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 EPYCQ99645 322 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 TRIM2Q9C040 744 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 RNF32Q9H0A6 362 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.96□□□□□ -0.82
SCN9A-205ENST00000454569 TMEM27Q9HBJ8 222 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 TIMMDC1Q9NPL8 285 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 MEPEQ9NQ76 525 aaPredicted RBP9.96□□□□□ -0.82
SCN9A-205ENST00000454569 C20orf141Q9NUB4 165 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 MED17Q9NVC6 651 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 TAS2R10Q9NYW0 307 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 PDP1Q9P0J1 537 aaPredicted RBP9.96□□□□□ -0.82
SCN9A-205ENST00000454569 ABI3Q9P2A4 366 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 OSGIN1Q9UJX0 560 aa9.96□□□□□ -0.82
SCN9A-205ENST00000454569 ATRXP46100 2492 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 ZC3H12DA2A288 527 aaKnown RBP9.95□□□□□ -0.82
SCN9A-205ENST00000454569 C7orf72A4D263 438 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 G3V2T6 193 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 FAAHO00519 579 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 EI24O14681 340 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 ADAMDEC1O15204 470 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 NME2P1O60361 137 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 E2F6O75461 281 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 GASTP01350 101 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 OPN1LWP04000 364 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 POU2F1P14859 743 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 NME2P22392 152 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 CASRP41180 1078 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 AQP4P55087 323 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 PMP22Q01453 160 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 EGR4Q05215 589 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 ST3GAL3Q11203 375 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 FOXF1Q12946 379 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 CBFBQ13951 182 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 TRAM2Q15035 370 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 MICAQ29983 383 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 PLPPR5Q32ZL2 321 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 ZNF766Q5HY98 468 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 ALG10BQ5I7T1 473 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 C1QL3Q5VWW1 255 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 WBP2NLQ6ICG8 309 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 ZNF613Q6PF04 617 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 BORAQ6PGQ7 559 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 SHQ1Q6PI26 577 aaKnown RBP9.95□□□□□ -0.82
SCN9A-205ENST00000454569 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.95□□□□□ -0.82
SCN9A-205ENST00000454569 ADGRG3Q86Y34 549 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 TOR1AIP2Q8NFQ8 470 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 OR1J4Q8NGS1 313 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 SNRNP27Q8WVK2 155 aaKnown RBP9.95□□□□□ -0.82
SCN9A-205ENST00000454569 SLC38A4Q969I6 547 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 C1GALT1C1Q96EU7 318 aa9.95□□□□□ -0.82
SCN9A-205ENST00000454569 NIPSNAP1Q9BPW8 284 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms