RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 EIF1AXP47813 144 aaKnown RBP12.7□□□□□ -0.38
HDAC4-205ENST00000454542 ZNF311Q5JNZ3 666 aa12.7□□□□□ -0.38
HDAC4-205ENST00000454542 HBMQ6B0K9 141 aa12.7□□□□□ -0.38
HDAC4-205ENST00000454542 NANOGP8Q6NSW7 305 aa12.7□□□□□ -0.38
HDAC4-205ENST00000454542 COMTD1Q86VU5 262 aa12.7□□□□□ -0.38
HDAC4-205ENST00000454542 GCNT2Q8N0V5 402 aa12.7□□□□□ -0.38
HDAC4-205ENST00000454542 CLIP4Q8N3C7 705 aa12.7□□□□□ -0.38
HDAC4-205ENST00000454542 RP9Q8TA86 221 aaKnown RBP12.7□□□□□ -0.38
HDAC4-205ENST00000454542 RNF128Q8TEB7 428 aa12.7□□□□□ -0.38
HDAC4-205ENST00000454542 SRXN1Q9BYN0 137 aa12.7□□□□□ -0.38
HDAC4-205ENST00000454542 NANOGQ9H9S0 305 aa12.7□□□□□ -0.38
HDAC4-205ENST00000454542 CTPS2Q9NRF8 586 aa12.7□□□□□ -0.38
HDAC4-205ENST00000454542 CHRNA9Q9UGM1 479 aa12.7□□□□□ -0.38
HDAC4-205ENST00000454542 ANGPT4Q9Y264 503 aa12.7□□□□□ -0.38
HDAC4-205ENST00000454542 SS18L1O75177 396 aaPredicted RBP12.69□□□□□ -0.38
HDAC4-205ENST00000454542 GCM2O75603 506 aaPredicted RBP12.69□□□□□ -0.38
HDAC4-205ENST00000454542 SLC6A2P23975 617 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 RYKP34925 604 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 SLC1A3P43003 542 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 HTR3AP46098 478 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 IDH2P48735 452 aaKnown RBP12.69□□□□□ -0.38
HDAC4-205ENST00000454542 MERTKQ12866 999 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 CYLC2Q14093 348 aaPredicted RBP12.69□□□□□ -0.38
HDAC4-205ENST00000454542 CYP51A1Q16850 503 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 SYT14P1Q58G82 188 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 RABL3Q5HYI8 236 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 PDSS1Q5T2R2 415 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 EEF1A1P5Q5VTE0 462 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 SP5Q6BEB4 398 aaPredicted RBP12.69□□□□□ -0.38
HDAC4-205ENST00000454542 C8orf82Q6P1X6 216 aaPredicted RBP12.69□□□□□ -0.38
HDAC4-205ENST00000454542 CHMP1BQ7LBR1 199 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 ZNF550Q7Z398 422 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 P4HA3Q7Z4N8 544 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 PIGWQ7Z7B1 504 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 MTDHQ86UE4 582 aaKnown RBP12.69□□□□□ -0.38
HDAC4-205ENST00000454542 KRT73Q86Y46 540 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 SLC30A8Q8IWU4 369 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 POU5F2Q8N7G0 328 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 PCYOX1LQ8NBM8 494 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 ZNF563Q8TA94 476 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 CPNE4Q96A23 557 aaPredicted RBP12.69□□□□□ -0.38
HDAC4-205ENST00000454542 INTS12Q96CB8 462 aaKnown RBP12.69□□□□□ -0.38
HDAC4-205ENST00000454542 RCN3Q96D15 328 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 GPATCH1Q9BRR8 931 aaKnown RBP12.69□□□□□ -0.38
HDAC4-205ENST00000454542 SPATA5L1Q9BVQ7 753 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 ADAM19Q9H013 955 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 CACYBPQ9HB71 228 aaKnown RBP12.69□□□□□ -0.38
HDAC4-205ENST00000454542 OSGIN1Q9UJX0 560 aa12.69□□□□□ -0.38
HDAC4-205ENST00000454542 MCTS1Q9ULC4 181 aaKnown RBP12.69□□□□□ -0.38
HDAC4-205ENST00000454542 SPIN1Q9Y657 262 aaPredicted RBP12.69□□□□□ -0.38
HDAC4-205ENST00000454542 ZNF208O43345 1280 aa12.68□□□□□ -0.38
HDAC4-205ENST00000454542 HNRNPRO43390 633 aaKnown RBP12.68□□□□□ -0.38
HDAC4-205ENST00000454542 MFN2O95140 757 aa12.68□□□□□ -0.38
HDAC4-205ENST00000454542 OPN1LWP04000 364 aa12.68□□□□□ -0.38
HDAC4-205ENST00000454542 GKN3PP0CG01 181 aa12.68□□□□□ -0.38
HDAC4-205ENST00000454542 COX4I1P13073 169 aa12.68□□□□□ -0.38
HDAC4-205ENST00000454542 PRG2P13727 222 aa12.68□□□□□ -0.38
HDAC4-205ENST00000454542 UQCRBP14927 111 aa12.68□□□□□ -0.38
HDAC4-205ENST00000454542 KIR2DL2P43627 348 aaPredicted RBP12.68□□□□□ -0.38
HDAC4-205ENST00000454542 PCYT1AP49585 367 aa12.68□□□□□ -0.38
HDAC4-205ENST00000454542 POLR2HP52434 150 aaKnown RBP12.68□□□□□ -0.38
HDAC4-205ENST00000454542 MAP2K6P52564 334 aa12.68□□□□□ -0.38
HDAC4-205ENST00000454542 CRYBA2P53672 197 aa12.68□□□□□ -0.38
HDAC4-205ENST00000454542 RAC3P60763 192 aa12.68□□□□□ -0.38
HDAC4-205ENST00000454542 TMEM176BQ3YBM2 270 aaPredicted RBP12.68□□□□□ -0.38
HDAC4-205ENST00000454542 MMEL1Q495T6 779 aa12.68□□□□□ -0.38
HDAC4-205ENST00000454542 VWA1Q6PCB0 445 aa12.68□□□□□ -0.38
HDAC4-205ENST00000454542 HACD2Q6Y1H2 254 aa12.68□□□□□ -0.38
HDAC4-205ENST00000454542 ADGRG3Q86Y34 549 aa12.68□□□□□ -0.38
HDAC4-205ENST00000454542 DMRTC2Q8IXT2 367 aaPredicted RBP12.68□□□□□ -0.38
HDAC4-205ENST00000454542 BHLHE22Q8NFJ8 381 aaPredicted RBP12.68□□□□□ -0.38
HDAC4-205ENST00000454542 OR10A6Q8NH74 314 aa12.68□□□□□ -0.38
HDAC4-205ENST00000454542 REXO5Q96IC2 774 aaKnown RBP12.68□□□□□ -0.38
HDAC4-205ENST00000454542 SH3GL1Q99961 368 aa12.68□□□□□ -0.38
HDAC4-205ENST00000454542 FAM107BQ9H098 131 aa12.68□□□□□ -0.38
HDAC4-205ENST00000454542 PIGMQ9H3S5 423 aa12.68□□□□□ -0.38
HDAC4-205ENST00000454542 ARMC7Q9H6L4 198 aa12.68□□□□□ -0.38
HDAC4-205ENST00000454542 PACSIN3Q9UKS6 424 aa12.68□□□□□ -0.38
HDAC4-205ENST00000454542 ZNF232Q9UNY5 417 aa12.68□□□□□ -0.38
HDAC4-205ENST00000454542 CRYBG3Q68DQ2 2970 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 FBN2P35556 2912 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 LOC100653049A0A140TA62 436 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 A0A1W2PNR3 127 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 PRORSD1PA6NEY8 169 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 FAM220BPB1ANY3 271 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 TMEM229AB2RXF0 380 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 SYT5O00445 386 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 FRS3O43559 492 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 DNPH1O43598 174 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 TPST1O60507 370 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 FZD7O75084 574 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 KRT34O76011 436 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 CGAP01215 116 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 FKBP2P26885 142 aaKnown RBP12.67□□□□□ -0.38
HDAC4-205ENST00000454542 TACR3P29371 465 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 PRDX6P30041 224 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 SLC7A1P30825 629 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 CLK1P49759 484 aaKnown RBP12.67□□□□□ -0.38
HDAC4-205ENST00000454542 DMTNQ08495 405 aa12.67□□□□□ -0.38
HDAC4-205ENST00000454542 SGCBQ16585 318 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms