RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 STAC2Q6ZMT1 411 aa9.52□□□□□ -0.89
DDX39A-203ENST00000454233 GRINAQ7Z429 371 aa9.52□□□□□ -0.89
DDX39A-203ENST00000454233 MAVSQ7Z434 540 aa9.52□□□□□ -0.89
DDX39A-203ENST00000454233 PEX5LQ8IYB4 626 aa9.52□□□□□ -0.89
DDX39A-203ENST00000454233 WDR60Q8WVS4 1066 aa9.52□□□□□ -0.89
DDX39A-203ENST00000454233 DYDC1Q8WWB3 177 aa9.52□□□□□ -0.89
DDX39A-203ENST00000454233 ZNF524Q96C55 264 aa9.52□□□□□ -0.89
DDX39A-203ENST00000454233 ZG16BQ96DA0 208 aa9.52□□□□□ -0.89
DDX39A-203ENST00000454233 ZHX1-C8orf76Q96EF9 292 aa9.52□□□□□ -0.89
DDX39A-203ENST00000454233 OR10A4Q9H209 315 aa9.52□□□□□ -0.89
DDX39A-203ENST00000454233 CACYBPQ9HB71 228 aaKnown RBP9.52□□□□□ -0.89
DDX39A-203ENST00000454233 CTPS2Q9NRF8 586 aa9.52□□□□□ -0.89
DDX39A-203ENST00000454233 ARGLU1Q9NWB6 273 aaPredicted RBP9.52□□□□□ -0.89
DDX39A-203ENST00000454233 P2RX2Q9UBL9 471 aa9.52□□□□□ -0.89
DDX39A-203ENST00000454233 GPR52Q9Y2T5 361 aa9.52□□□□□ -0.89
DDX39A-203ENST00000454233 MED13LQ71F56 2210 aa9.52□□□□□ -0.89
DDX39A-203ENST00000454233 PRRC2AP48634 2157 aaKnown RBP9.51□□□□□ -0.89
DDX39A-203ENST00000454233 HIVEP1P15822 2718 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 A0A1W2PPR1 153 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 FAM234BA2RU67 622 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 CLDN24A6NM45 220 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 BCAS1O75363 584 aaPredicted RBP9.51□□□□□ -0.89
DDX39A-203ENST00000454233 C1QCP02747 245 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 CD99P14209 185 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 UQCRBP14927 111 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 HTR3AP46098 478 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 IDH2P48735 452 aaKnown RBP9.51□□□□□ -0.89
DDX39A-203ENST00000454233 DIO1P49895 249 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 CRISP3P54108 245 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 DSTNP60981 165 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 RASGEF1BQ0VAM2 473 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 BEX5Q5H9J7 111 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 TFAP2EQ6VUC0 442 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 TMPPEQ6ZT21 453 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 NUFIP2Q7Z417 695 aaKnown RBP9.51□□□□□ -0.89
DDX39A-203ENST00000454233 TGIF2LYQ8IUE0 185 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 ZNF440Q8IYI8 595 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 STEAP2Q8NFT2 490 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 OR9I1Q8NGQ6 314 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 CNOT9Q92600 299 aaKnown RBP9.51□□□□□ -0.89
DDX39A-203ENST00000454233 VPS33AQ96AX1 596 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 CCDC106Q9BWC9 280 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 HDHD5Q9BXW7 423 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 ACTR6Q9GZN1 396 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 RAD21L1Q9H4I0 556 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 TPT1P8Q9HAU6 139 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 BCO1Q9HAY6 547 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 TCF7L2Q9NQB0 619 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 BEX4Q9NWD9 120 aaPredicted RBP9.51□□□□□ -0.89
DDX39A-203ENST00000454233 THUMPD1Q9NXG2 353 aaKnown RBP9.51□□□□□ -0.89
DDX39A-203ENST00000454233 CHRNA9Q9UGM1 479 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 HDGFL3Q9Y3E1 203 aa9.51□□□□□ -0.89
DDX39A-203ENST00000454233 SMAD9O15198 467 aaKnown RBP9.5□□□□□ -0.89
DDX39A-203ENST00000454233 SIAH2O43255 324 aa9.5□□□□□ -0.89
DDX39A-203ENST00000454233 CYTIPO60759 359 aa9.5□□□□□ -0.89
DDX39A-203ENST00000454233 BCHEP06276 602 aa9.5□□□□□ -0.89
DDX39A-203ENST00000454233 FESP07332 822 aa9.5□□□□□ -0.89
DDX39A-203ENST00000454233 ETFAP13804 333 aa9.5□□□□□ -0.89
DDX39A-203ENST00000454233 CD53P19397 219 aa9.5□□□□□ -0.89
DDX39A-203ENST00000454233 KLK2P20151 261 aa9.5□□□□□ -0.89
DDX39A-203ENST00000454233 CCNA2P20248 432 aa9.5□□□□□ -0.89
DDX39A-203ENST00000454233 FPR1P21462 350 aa9.5□□□□□ -0.89
DDX39A-203ENST00000454233 RPS4Y1P22090 263 aaKnown RBP9.5□□□□□ -0.89
DDX39A-203ENST00000454233 IL32P24001 234 aa9.5□□□□□ -0.89
DDX39A-203ENST00000454233 CLK1P49759 484 aaKnown RBP9.5□□□□□ -0.89
DDX39A-203ENST00000454233 NR1H2P55055 460 aa9.5□□□□□ -0.89
DDX39A-203ENST00000454233 LIN52Q52LA3 116 aa9.5□□□□□ -0.89
DDX39A-203ENST00000454233 TTMPQ5BVD1 217 aa9.5□□□□□ -0.89
DDX39A-203ENST00000454233 MRPL2Q5T653 305 aaKnown RBP9.5□□□□□ -0.89
DDX39A-203ENST00000454233 HDXQ7Z353 690 aa9.5□□□□□ -0.89
DDX39A-203ENST00000454233 MTDHQ86UE4 582 aaKnown RBP9.5□□□□□ -0.89
DDX39A-203ENST00000454233 CXorf67Q86X51 503 aaPredicted RBP9.5□□□□□ -0.89
DDX39A-203ENST00000454233 WFDC8Q8IUA0 241 aa9.5□□□□□ -0.89
DDX39A-203ENST00000454233 GABRG1Q8N1C3 465 aa9.5□□□□□ -0.89
DDX39A-203ENST00000454233 USB1Q9BQ65 265 aaKnown RBP9.5□□□□□ -0.89
DDX39A-203ENST00000454233 PSD2Q9BQI7 771 aa9.5□□□□□ -0.89
DDX39A-203ENST00000454233 CCDC28BQ9BUN5 200 aa9.5□□□□□ -0.89
DDX39A-203ENST00000454233 UBTD1Q9HAC8 227 aa9.5□□□□□ -0.89
DDX39A-203ENST00000454233 SLCO1B3Q9NPD5 702 aa9.5□□□□□ -0.89
DDX39A-203ENST00000454233 SLC6A13Q9NSD5 602 aa9.5□□□□□ -0.89
DDX39A-203ENST00000454233 EMC3Q9P0I2 261 aa9.5□□□□□ -0.89
DDX39A-203ENST00000454233 TMED7-TICAM2A0A0A6YYA0 188 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.49□□□□□ -0.89
DDX39A-203ENST00000454233 CFAP73A6NFT4 308 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 ZNF724A8MTY0 619 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 HMGB1P1B2RPK0 211 aaPredicted RBP9.49□□□□□ -0.89
DDX39A-203ENST00000454233 FAAHO00519 579 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 AP3D1O14617 1153 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 DNPH1O43598 174 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 GCM2O75603 506 aaPredicted RBP9.49□□□□□ -0.89
DDX39A-203ENST00000454233 PMS2P2O95744 297 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 ADAP00813 363 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 THBDP07204 575 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 SLC1A3P43003 542 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 OR3A2P47893 321 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 MRPL19P49406 292 aaKnown RBP9.49□□□□□ -0.89
DDX39A-203ENST00000454233 IDH3AP50213 366 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 POLR2HP52434 150 aaKnown RBP9.49□□□□□ -0.89
DDX39A-203ENST00000454233 MAP2K6P52564 334 aa9.49□□□□□ -0.89
DDX39A-203ENST00000454233 MVDP53602 400 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms