RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 POU3F2P20265 443 aaPredicted RBP13.21□□□□□ -0.29
VPS16-205ENST00000453689 ME2P23368 584 aa13.21□□□□□ -0.29
VPS16-205ENST00000453689 CEACAM8P31997 349 aaPredicted RBP13.21□□□□□ -0.29
VPS16-205ENST00000453689 P2RX1P51575 399 aa13.21□□□□□ -0.29
VPS16-205ENST00000453689 ZNF41P51814 821 aaPredicted RBP13.21□□□□□ -0.29
VPS16-205ENST00000453689 CRYBA2P53672 197 aa13.21□□□□□ -0.29
VPS16-205ENST00000453689 SUMO3P55854 103 aaPredicted RBP13.21□□□□□ -0.29
VPS16-205ENST00000453689 DMTNQ08495 405 aa13.21□□□□□ -0.29
VPS16-205ENST00000453689 SKP2Q13309 424 aa13.21□□□□□ -0.29
VPS16-205ENST00000453689 MRPL2Q5T653 305 aaKnown RBP13.21□□□□□ -0.29
VPS16-205ENST00000453689 YTHDF3Q7Z739 585 aaKnown RBP13.21□□□□□ -0.29
VPS16-205ENST00000453689 ADGRE4PQ86SQ3 457 aa13.21□□□□□ -0.29
VPS16-205ENST00000453689 GRAMD2AQ8IUY3 354 aa13.21□□□□□ -0.29
VPS16-205ENST00000453689 LIX1LQ8IVB5 337 aa13.21□□□□□ -0.29
VPS16-205ENST00000453689 UBQLNLQ8IYU4 475 aa13.21□□□□□ -0.29
VPS16-205ENST00000453689 TMCO5AQ8N6Q1 288 aa13.21□□□□□ -0.29
VPS16-205ENST00000453689 NAXEQ8NCW5 288 aa13.21□□□□□ -0.29
VPS16-205ENST00000453689 TOR1AIP2Q8NFQ8 470 aa13.21□□□□□ -0.29
VPS16-205ENST00000453689 MBD3L2Q8NHZ7 208 aaPredicted RBP13.21□□□□□ -0.29
VPS16-205ENST00000453689 FAM162AQ96A26 154 aa13.21□□□□□ -0.29
VPS16-205ENST00000453689 ZBTB8AQ96BR9 441 aa13.21□□□□□ -0.29
VPS16-205ENST00000453689 CLPTM1LQ96KA5 538 aa13.21□□□□□ -0.29
VPS16-205ENST00000453689 RNF145Q96MT1 663 aa13.21□□□□□ -0.29
VPS16-205ENST00000453689 PINK1Q9BXM7 581 aa13.21□□□□□ -0.29
VPS16-205ENST00000453689 CADM1Q9BY67 442 aaKnown RBP13.21□□□□□ -0.29
VPS16-205ENST00000453689 UCK2Q9BZX2 261 aa13.21□□□□□ -0.29
VPS16-205ENST00000453689 LAT2Q9GZY6 243 aa13.21□□□□□ -0.29
VPS16-205ENST00000453689 MUC13Q9H3R2 512 aa13.21□□□□□ -0.29
VPS16-205ENST00000453689 CHST11Q9NPF2 352 aa13.21□□□□□ -0.29
VPS16-205ENST00000453689 EXOSC3Q9NQT5 275 aaKnown RBP13.21□□□□□ -0.29
VPS16-205ENST00000453689 MED17Q9NVC6 651 aa13.21□□□□□ -0.29
VPS16-205ENST00000453689 C7orf72A4D263 438 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 NKX2-6A6NCS4 301 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 CLCA1A8K7I4 914 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 HSPB2A8KAH6 182 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 ARPC2O15144 300 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 BCAS1O75363 584 aaPredicted RBP13.2□□□□□ -0.3
VPS16-205ENST00000453689 CYP7B1O75881 506 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 NUDT14O95848 222 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 IL2RAP01589 272 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 LINGO3P0C6S8 592 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 UBTFL6P0CB48 400 aaPredicted RBP13.2□□□□□ -0.3
VPS16-205ENST00000453689 NCK1P16333 377 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 SUCLG1P53597 346 aaKnown RBP13.2□□□□□ -0.3
VPS16-205ENST00000453689 CLDN15P56746 228 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 PLAURQ03405 335 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 HSPB2Q16082 182 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 GLYATQ6IB77 296 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 PGM2L1Q6PCE3 622 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 PLXDC2Q6UX71 529 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 ASRGL1Q7L266 308 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 ZNF440Q8IYI8 595 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 GTPBP8Q8N3Z3 284 aaPredicted RBP13.2□□□□□ -0.3
VPS16-205ENST00000453689 C9orf106Q8NAJ2 232 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 SMYD1Q8NB12 490 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 POC1BQ8TC44 478 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 SMPDL3BQ92485 455 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 CNOT9Q92600 299 aaKnown RBP13.2□□□□□ -0.3
VPS16-205ENST00000453689 UCN2Q96RP3 112 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 PCDHAC1Q9H158 963 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 MMADHCQ9H3L0 296 aaPredicted RBP13.2□□□□□ -0.3
VPS16-205ENST00000453689 GORASP2Q9H8Y8 452 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 KLHL28Q9NXS3 571 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 DNAJB12Q9NXW2 375 aaKnown RBP13.2□□□□□ -0.3
VPS16-205ENST00000453689 CLCF1Q9UBD9 225 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 SLC13A4Q9UKG4 626 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 CHST2Q9Y4C5 530 aa13.2□□□□□ -0.3
VPS16-205ENST00000453689 PKDREJQ9NTG1 2253 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 CRYBG3Q68DQ2 2970 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 H0YC42 278 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 SYT5O00445 386 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 SEC14L5O43304 696 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 CD247P20963 164 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 PSMA4P25789 261 aaKnown RBP13.19□□□□□ -0.3
VPS16-205ENST00000453689 MSX2P35548 267 aaPredicted RBP13.19□□□□□ -0.3
VPS16-205ENST00000453689 KCNJ5P48544 419 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 CCR4P51679 360 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 TPD52P55327 224 aaPredicted RBP13.19□□□□□ -0.3
VPS16-205ENST00000453689 CLDN20P56880 219 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 TFF3Q07654 80 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 FOXF1Q12946 379 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 TRIM25Q14258 630 aaKnown RBP13.19□□□□□ -0.3
VPS16-205ENST00000453689 TOMM34Q15785 309 aaPredicted RBP13.19□□□□□ -0.3
VPS16-205ENST00000453689 ZSCAN26Q16670 478 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 CYBRD1Q53TN4 286 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 CLIP4Q8N3C7 705 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 MEIOBQ8N635 442 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 RELL2Q8NC24 303 aaPredicted RBP13.19□□□□□ -0.3
VPS16-205ENST00000453689 GPR32P1Q8NGA4 272 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 OR5W2Q8NH69 310 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 GPR119Q8TDV5 335 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 SLC35B4Q969S0 331 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 ZNF524Q96C55 264 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 CCDC124Q96CT7 223 aaKnown RBP13.19□□□□□ -0.3
VPS16-205ENST00000453689 ASB9Q96DX5 294 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 ARSGQ96EG1 525 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 NSMCE2Q96MF7 247 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 RSPO3Q9BXY4 272 aaPredicted RBP13.19□□□□□ -0.3
VPS16-205ENST00000453689 EVA1AQ9H8M9 152 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 KCNJ16Q9NPI9 418 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms