RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 OR2Y1Q8NGV0 311 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 CT55Q8WUE5 264 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 SLC38A5Q8WUX1 472 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 TMEM19Q96HH6 336 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 OR5M11Q96RB7 305 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 PIP5K1AQ99755 562 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 KCNS3Q9BQ31 491 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 SPRY4Q9C004 299 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 FAM117AQ9C073 453 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 PIGUQ9H490 435 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 RPRD1BQ9NQG5 326 aaKnown RBP14.62□□□□□ -0.07
SNX17-204ENST00000453453 DUSP22Q9NRW4 184 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 PAQR5Q9NXK6 330 aaPredicted RBP14.62□□□□□ -0.07
SNX17-204ENST00000453453 SSR3Q9UNL2 185 aa14.62□□□□□ -0.07
SNX17-204ENST00000453453 SDK2Q58EX2 2172 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 A0A1W2PQ09 198 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 AK1P00568 194 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 HSMCR30P0CW71 290 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 ACP2P11117 423 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 MYL9P24844 172 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 EMDP50402 254 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 CRISP1P54107 249 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 P2RX3P56373 397 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 RAB25P57735 213 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 EEF1A2Q05639 463 aaKnown RBP14.61□□□□□ -0.07
SNX17-204ENST00000453453 TNK1Q13470 666 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 LARS2Q15031 903 aaKnown RBP14.61□□□□□ -0.07
SNX17-204ENST00000453453 SOWAHCQ53LP3 525 aaPredicted RBP14.61□□□□□ -0.07
SNX17-204ENST00000453453 CRB2Q5IJ48 1285 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 SLC35F1Q5T1Q4 408 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 METAP1DQ6UB28 335 aaPredicted RBP14.61□□□□□ -0.07
SNX17-204ENST00000453453 TMEM205Q6UW68 189 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 Q6ZPB1 254 aaPredicted RBP14.61□□□□□ -0.07
SNX17-204ENST00000453453 TIPARPQ7Z3E1 657 aaKnown RBP14.61□□□□□ -0.07
SNX17-204ENST00000453453 CPEB2Q7Z5Q1 589 aaKnown RBP14.61□□□□□ -0.07
SNX17-204ENST00000453453 SLC16A11Q8NCK7 471 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 PROKR2Q8NFJ6 384 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 BBS10Q8TAM1 723 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 GPR151Q8TDV0 419 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 OTUB1Q96FW1 271 aaPredicted RBP14.61□□□□□ -0.07
SNX17-204ENST00000453453 FRMD6Q96NE9 622 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 SLC46A1Q96NT5 459 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 NEDD4LQ96PU5 975 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 ZNF607Q96SK3 696 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 LPAR4Q99677 370 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 RNF121Q9H920 327 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 ISYNA1Q9NPH2 558 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 DLL3Q9NYJ7 618 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 STMN3Q9NZ72 180 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 ENPP4Q9Y6X5 453 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 DSPPQ9NZW4 1301 aa14.61□□□□□ -0.07
SNX17-204ENST00000453453 A6NL46 340 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 OR6C76A6NM76 312 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 C21orf140B9A014 251 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 HRKO00198 91 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 RAD1O60671 282 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 TMCC2O75069 709 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 DDAH2O95865 285 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 ADAP00813 363 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 RHCEP18577 417 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 AQP1P29972 269 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 CDH12P55289 794 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 FOXL2P58012 376 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 C1DQ13901 141 aaKnown RBP14.6□□□□□ -0.07
SNX17-204ENST00000453453 QPRTQ15274 297 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 DUSP5Q16690 384 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 CCDC58Q4VC31 144 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 PRAMEF8Q5VWM4 474 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 PRAMEF7Q5VXH5 474 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 HLA-DQA1Q5Y7H0 255 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 PTCHD4Q6ZW05 846 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 WDR53Q7Z5U6 358 aaPredicted RBP14.6□□□□□ -0.07
SNX17-204ENST00000453453 GALNT10Q86SR1 603 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 ZNF615Q8N8J6 731 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 CDS1Q92903 461 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 SLC35A4Q96G79 324 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 TMEM80Q96HE8 168 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 NIPSNAP1Q9BPW8 284 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 LMF2Q9BU23 707 aaKnown RBP14.6□□□□□ -0.07
SNX17-204ENST00000453453 BARHL1Q9BZE3 327 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 CACYBPQ9HB71 228 aaKnown RBP14.6□□□□□ -0.07
SNX17-204ENST00000453453 AMBNQ9NP70 447 aa14.6□□□□□ -0.07
SNX17-204ENST00000453453 CNOT1A5YKK6 2376 aaKnown RBP14.6□□□□□ -0.07
SNX17-204ENST00000453453 A0A0G2JPF8 293 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 HNRNPCL2B2RXH8 293 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 B4DXG7 233 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 HNRNPCL3B7ZW38 293 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 TPD52L2O43399 206 aaKnown RBP14.59□□□□□ -0.07
SNX17-204ENST00000453453 NME6O75414 186 aaPredicted RBP14.59□□□□□ -0.07
SNX17-204ENST00000453453 GCM2O75603 506 aaPredicted RBP14.59□□□□□ -0.07
SNX17-204ENST00000453453 KLF7O75840 302 aaPredicted RBP14.59□□□□□ -0.07
SNX17-204ENST00000453453 NKX2-2O95096 273 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 CRYZL1O95825 349 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 C1QBP02746 253 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 HNRNPCL4P0DMR1 293 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 GAAP10253 952 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 GABRA3P34903 492 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 RPS19P39019 145 aaKnown RBP14.59□□□□□ -0.07
SNX17-204ENST00000453453 CRYBB2P43320 205 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 POU6F2P78424 691 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms