RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 PARPBPQ9NWS1 579 aa12.55□□□□□ -0.4
LYSMD3-202ENST00000453259 ATP6V1HQ9UI12 483 aa12.55□□□□□ -0.4
LYSMD3-202ENST00000453259 PYCARDQ9ULZ3 195 aa12.55□□□□□ -0.4
LYSMD3-202ENST00000453259 HDGFL3Q9Y3E1 203 aa12.55□□□□□ -0.4
LYSMD3-202ENST00000453259 DUXAA6NLW8 204 aa12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 ZNF716A6NP11 495 aa12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 ESPNB1AK53 854 aa12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 OIP5O43482 229 aa12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 AKAP10O43572 662 aa12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 MRPL33O75394 65 aaKnown RBP12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 PMS2P2O95744 297 aa12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 APEHP13798 732 aaKnown RBP12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 PGCP20142 388 aa12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 PTNP21246 168 aa12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 EDNRAP25101 427 aa12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 MAPK1P28482 360 aa12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 GCAP28676 217 aa12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 APOBEC1P41238 236 aaKnown RBP12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 CCT3P49368 545 aaKnown RBP12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 CHRNEQ04844 493 aa12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 SKP2Q13309 424 aa12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 TP53BP2Q13625 1128 aa12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 LSM12Q3MHD2 195 aaKnown RBP12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 UGT2A3Q6UWM9 527 aa12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 OR5P2Q8WZ92 322 aa12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 ANP32BQ92688 251 aaKnown RBP12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 MSI2Q96DH6 328 aaKnown RBP12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 BOD1Q96IK1 185 aa12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 MOV10Q9HCE1 1003 aaKnown RBP12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 OBP2BQ9NPH6 170 aa12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 GPATCH2Q9NW75 528 aa12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 PSMC3IPQ9P2W1 217 aaPredicted RBP12.54□□□□□ -0.4
LYSMD3-202ENST00000453259 ALPK2Q86TB3 2170 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 SERINC4A6NH21 518 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 M0R1B8 84 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 PDLIM1O00151 329 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 LSM1O15116 133 aaKnown RBP12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 SCAMP2O15127 329 aaKnown RBP12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 TCF21O43680 179 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 LYPLA1O75608 230 aaPredicted RBP12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 PDE5AO76074 875 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 WNT11O96014 354 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 GUSBP08236 651 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 ECHS1P30084 290 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 CCR4P51679 360 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 SNRPD2P62316 118 aaKnown RBP12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 RPL38P63173 70 aaKnown RBP12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 SPOCK1Q08629 439 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 GGTLC2Q14390 218 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 ZNF141Q15928 474 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 SWI5Q1ZZU3 235 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 RFTN2Q52LD8 501 aaPredicted RBP12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 MEX3DQ86XN8 651 aaKnown RBP12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 ARIH2OSQ8N7S6 290 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 ZNF614Q8N883 585 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 ZFAND2BQ8WV99 257 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 HPS1Q92902 700 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 PRPF18Q99633 342 aaKnown RBP12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 ANKZF1Q9H8Y5 726 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 CHODLQ9H9P2 273 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 ACER3Q9NUN7 267 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 OXSMQ9NWU1 459 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 SLC9A8Q9Y2E8 581 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 ATP23Q9Y6H3 246 aa12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.53□□□□□ -0.4
LYSMD3-202ENST00000453259 C9JVG2 144 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 AZIN1O14977 448 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 EIF1BO60739 113 aaKnown RBP12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 STX11O75558 287 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 PROCP04070 461 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 ZNF23P17027 643 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 PCMT1P22061 227 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 MAGEA8P43361 318 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 CCT5P48643 541 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 MAP2K6P52564 334 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 SESN3P58005 492 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 MERTKQ12866 999 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 WHAMMP3Q1A5X7 153 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 SPDYE7PQ495Y7 208 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 KLHL24Q6TFL4 600 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 SYT10Q6XYQ8 523 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 EIF3MQ7L2H7 374 aaKnown RBP12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 IFT81Q8WYA0 676 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 ZNF775Q96BV0 537 aaPredicted RBP12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 OTUB1Q96FW1 271 aaPredicted RBP12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 SDF2Q99470 211 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 THUMPD3Q9BV44 507 aaKnown RBP12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 PRR14Q9BWN1 585 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 EML4Q9HC35 981 aaKnown RBP12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 SLC17A5Q9NRA2 495 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 CHRNA9Q9UGM1 479 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 MID2Q9UJV3 735 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 EMCNQ9ULC0 261 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 TRAPPC4Q9Y296 219 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 SLC35A3Q9Y2D2 325 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 MALRD1Q5VYJ5 2156 aa12.52□□□□□ -0.41
LYSMD3-202ENST00000453259 A0A0A6YYJ9 748 aa12.51□□□□□ -0.41
LYSMD3-202ENST00000453259 SLC35F4A4IF30 521 aa12.51□□□□□ -0.41
LYSMD3-202ENST00000453259 SLCO1B7G3V0H7 640 aa12.51□□□□□ -0.41
LYSMD3-202ENST00000453259 AGR2O95994 175 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms