RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 GSNP06396 782 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 IDO1P14902 403 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 FOSL1P15407 271 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 FPR1P21462 350 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 RPS4Y1P22090 263 aaKnown RBP11.08□□□□□ -0.64
CPSF4-208ENST00000452047 DIO1P49895 249 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 MVDP53602 400 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 KCNJ10P78508 379 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 TXNL4AP83876 142 aaKnown RBP11.08□□□□□ -0.64
CPSF4-208ENST00000452047 HPCAP84074 193 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 LRRC74AQ0VAA2 488 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 SYPL1Q16563 259 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 SLC9B1Q4ZJI4 515 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 PDCD4Q53EL6 469 aaKnown RBP11.08□□□□□ -0.64
CPSF4-208ENST00000452047 COX20Q5RI15 118 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 ATG16L1Q676U5 607 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 C20orf204Q6ZNR8 217 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 LRRC75A-AS1Q8N1F1 130 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 SLC25A43Q8WUT9 341 aaPredicted RBP11.08□□□□□ -0.64
CPSF4-208ENST00000452047 IGFBPL1Q8WX77 278 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 ZNF75CPQ92670 426 aaPredicted RBP11.08□□□□□ -0.64
CPSF4-208ENST00000452047 PIGTQ969N2 578 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 ARL8AQ96BM9 186 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 TACO1Q9BSH4 297 aaKnown RBP11.08□□□□□ -0.64
CPSF4-208ENST00000452047 TMEM204Q9BSN7 226 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 MANSC1Q9H8J5 431 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 NKIRAS1Q9NYS0 192 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 LIPT1Q9Y234 373 aa11.08□□□□□ -0.64
CPSF4-208ENST00000452047 ZNF814B7Z6K7 855 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 KLF11O14901 512 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 DIAPH2O60879 1101 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 ERLIN1O75477 346 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 EDNRAP25101 427 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 RYKP34925 604 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 APOBEC1P41238 236 aaKnown RBP11.07□□□□□ -0.64
CPSF4-208ENST00000452047 OR3A2P47893 321 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 NR1H2P55055 460 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 NKX6-1P78426 367 aaPredicted RBP11.07□□□□□ -0.64
CPSF4-208ENST00000452047 RASGEF1BQ0VAM2 473 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 TSC22D1Q15714 1073 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 MAPK11Q15759 364 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 SFRP5Q5T4F7 317 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 SHEQ5VZ18 495 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 ABLIM2Q6H8Q1 611 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 SEZ6L2Q6UXD5 910 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 LRRC74BQ6ZQY2 392 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 ZNF621Q6ZSS3 439 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 TMPPEQ6ZT21 453 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 Q6ZT83 130 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 GRINAQ7Z429 371 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 WFDC8Q8IUA0 241 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 CMIPQ8IY22 773 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 STEAP2Q8NFT2 490 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 PIWIL2Q8TC59 973 aaKnown RBP11.07□□□□□ -0.64
CPSF4-208ENST00000452047 PNPT1Q8TCS8 783 aaKnown RBP11.07□□□□□ -0.64
CPSF4-208ENST00000452047 CNOT9Q92600 299 aaKnown RBP11.07□□□□□ -0.64
CPSF4-208ENST00000452047 S100PBPQ96BU1 408 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 PLPPR2Q96GM1 343 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 ARL5BQ96KC2 179 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 OR52B2Q96RD2 323 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 ZNF300Q96RE9 604 aaPredicted RBP11.07□□□□□ -0.64
CPSF4-208ENST00000452047 ZBTB18Q99592 522 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 CCL19Q99731 98 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 HDHD5Q9BXW7 423 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 CTPS2Q9NRF8 586 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 SDR39U1Q9NRG7 319 aaPredicted RBP11.07□□□□□ -0.64
CPSF4-208ENST00000452047 SERINC1Q9NRX5 453 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.07□□□□□ -0.64
CPSF4-208ENST00000452047 CHRNA9Q9UGM1 479 aa11.07□□□□□ -0.64
CPSF4-208ENST00000452047 IGKV3D-15A0A087WSY6 115 aa11.06□□□□□ -0.64
CPSF4-208ENST00000452047 ZNF724A8MTY0 619 aa11.06□□□□□ -0.64
CPSF4-208ENST00000452047 SULT2B1O00204 365 aa11.06□□□□□ -0.64
CPSF4-208ENST00000452047 RFXANKO14593 260 aa11.06□□□□□ -0.64
CPSF4-208ENST00000452047 AP3D1O14617 1153 aa11.06□□□□□ -0.64
CPSF4-208ENST00000452047 SMPD2O60906 423 aa11.06□□□□□ -0.64
CPSF4-208ENST00000452047 SLC22A3O75751 556 aa11.06□□□□□ -0.64
CPSF4-208ENST00000452047 PLAUP00749 431 aa11.06□□□□□ -0.64
CPSF4-208ENST00000452047 ADAP00813 363 aa11.06□□□□□ -0.64
CPSF4-208ENST00000452047 IL6P05231 212 aa11.06□□□□□ -0.64
CPSF4-208ENST00000452047 FESP07332 822 aa11.06□□□□□ -0.64
CPSF4-208ENST00000452047 MAGEA8P43361 318 aa11.06□□□□□ -0.64
CPSF4-208ENST00000452047 ANXA11P50995 505 aaKnown RBP11.06□□□□□ -0.64
CPSF4-208ENST00000452047 CSNK2A1P68400 391 aaPredicted RBP11.06□□□□□ -0.64
CPSF4-208ENST00000452047 P2RY6Q15077 328 aa11.06□□□□□ -0.64
CPSF4-208ENST00000452047 GSTA3Q16772 222 aa11.06□□□□□ -0.64
CPSF4-208ENST00000452047 NXNQ6DKJ4 435 aa11.06□□□□□ -0.64
CPSF4-208ENST00000452047 DNAJC14Q6Y2X3 702 aaPredicted RBP11.06□□□□□ -0.64
CPSF4-208ENST00000452047 ZNF704Q6ZNC4 412 aaPredicted RBP11.06□□□□□ -0.64
CPSF4-208ENST00000452047 LSRQ86X29 649 aaPredicted RBP11.06□□□□□ -0.64
CPSF4-208ENST00000452047 ADGRG3Q86Y34 549 aa11.06□□□□□ -0.64
CPSF4-208ENST00000452047 ARFGAP2Q8N6H7 521 aa11.06□□□□□ -0.64
CPSF4-208ENST00000452047 OR9I1Q8NGQ6 314 aa11.06□□□□□ -0.64
CPSF4-208ENST00000452047 ZNF563Q8TA94 476 aa11.06□□□□□ -0.64
CPSF4-208ENST00000452047 GSX1Q9H4S2 264 aaPredicted RBP11.06□□□□□ -0.64
CPSF4-208ENST00000452047 ZIM2Q9NZV7 527 aa11.06□□□□□ -0.64
CPSF4-208ENST00000452047 PRSS50Q9UI38 385 aa11.06□□□□□ -0.64
CPSF4-208ENST00000452047 SPIN1Q9Y657 262 aaPredicted RBP11.06□□□□□ -0.64
CPSF4-208ENST00000452047 DSPPQ9NZW4 1301 aa11.06□□□□□ -0.64
CPSF4-208ENST00000452047 NAV3Q8IVL0 2385 aa11.05□□□□□ -0.64
CPSF4-208ENST00000452047 ZNF716A6NP11 495 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms