RNA–Protein interactions for RNA: ENST00000449617.5

SEC22C-209, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 2

Gene SEC22C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-209ENST00000449617 ZNF563Q8TA94 476 aa11.64□□□□□ -0.55
SEC22C-209ENST00000449617 CNOT9Q92600 299 aaKnown RBP11.64□□□□□ -0.55
SEC22C-209ENST00000449617 CCDC106Q9BWC9 280 aa11.64□□□□□ -0.55
SEC22C-209ENST00000449617 UBTD1Q9HAC8 227 aa11.64□□□□□ -0.55
SEC22C-209ENST00000449617 EXOSC3Q9NQT5 275 aaKnown RBP11.64□□□□□ -0.55
SEC22C-209ENST00000449617 SERINC1Q9NRX5 453 aa11.64□□□□□ -0.55
SEC22C-209ENST00000449617 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.64□□□□□ -0.55
SEC22C-209ENST00000449617 ZIM2Q9NZV7 527 aa11.64□□□□□ -0.55
SEC22C-209ENST00000449617 ING1Q9UK53 422 aaPredicted RBP11.64□□□□□ -0.55
SEC22C-209ENST00000449617 USH1CQ9Y6N9 552 aa11.64□□□□□ -0.55
SEC22C-209ENST00000449617 RAI1Q7Z5J4 1906 aaPredicted RBP11.64□□□□□ -0.55
SEC22C-209ENST00000449617 AGAP5A6NIR3 686 aa11.63□□□□□ -0.55
SEC22C-209ENST00000449617 UBDO15205 165 aa11.63□□□□□ -0.55
SEC22C-209ENST00000449617 ADAM11O75078 769 aa11.63□□□□□ -0.55
SEC22C-209ENST00000449617 KRT75O95678 551 aa11.63□□□□□ -0.55
SEC22C-209ENST00000449617 FESP07332 822 aa11.63□□□□□ -0.55
SEC22C-209ENST00000449617 YES1P07947 543 aa11.63□□□□□ -0.55
SEC22C-209ENST00000449617 TFPIP10646 304 aa11.63□□□□□ -0.55
SEC22C-209ENST00000449617 PSMB1P20618 241 aaKnown RBP11.63□□□□□ -0.55
SEC22C-209ENST00000449617 RIPPLY3P57055 190 aa11.63□□□□□ -0.55
SEC22C-209ENST00000449617 ADAM8P78325 824 aa11.63□□□□□ -0.55
SEC22C-209ENST00000449617 FOXD4Q12950 439 aaPredicted RBP11.63□□□□□ -0.55
SEC22C-209ENST00000449617 LRRC74BQ6ZQY2 392 aa11.63□□□□□ -0.55
SEC22C-209ENST00000449617 LSRQ86X29 649 aaPredicted RBP11.63□□□□□ -0.55
SEC22C-209ENST00000449617 GABRG1Q8N1C3 465 aa11.63□□□□□ -0.55
SEC22C-209ENST00000449617 OR9I1Q8NGQ6 314 aa11.63□□□□□ -0.55
SEC22C-209ENST00000449617 SLC25A43Q8WUT9 341 aaPredicted RBP11.63□□□□□ -0.55
SEC22C-209ENST00000449617 PSD2Q9BQI7 771 aa11.63□□□□□ -0.55
SEC22C-209ENST00000449617 TACO1Q9BSH4 297 aaKnown RBP11.63□□□□□ -0.55
SEC22C-209ENST00000449617 BCO1Q9HAY6 547 aa11.63□□□□□ -0.55
SEC22C-209ENST00000449617 CTPS2Q9NRF8 586 aa11.63□□□□□ -0.55
SEC22C-209ENST00000449617 BEX4Q9NWD9 120 aaPredicted RBP11.63□□□□□ -0.55
SEC22C-209ENST00000449617 KLHL9Q9P2J3 617 aa11.63□□□□□ -0.55
SEC22C-209ENST00000449617 CHRNA9Q9UGM1 479 aa11.63□□□□□ -0.55
SEC22C-209ENST00000449617 NF1P21359 2839 aa11.63□□□□□ -0.55
SEC22C-209ENST00000449617 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.62□□□□□ -0.55
SEC22C-209ENST00000449617 SULT2B1O00204 365 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 AP3D1O14617 1153 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 KLF4O43474 513 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 CYTIPO60759 359 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 GCM2O75603 506 aaPredicted RBP11.62□□□□□ -0.55
SEC22C-209ENST00000449617 RPS4Y1P22090 263 aaKnown RBP11.62□□□□□ -0.55
SEC22C-209ENST00000449617 APOBEC1P41238 236 aaKnown RBP11.62□□□□□ -0.55
SEC22C-209ENST00000449617 DIO1P49895 249 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 POLR2JP52435 117 aaKnown RBP11.62□□□□□ -0.55
SEC22C-209ENST00000449617 MVDP53602 400 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 RASGEF1BQ0VAM2 473 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 TSC22D1Q15714 1073 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 GTDC1Q4AE62 458 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 BEX5Q5H9J7 111 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 TMPPEQ6ZT21 453 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 GRINAQ7Z429 371 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 WFDC8Q8IUA0 241 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 CMIPQ8IY22 773 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 MIER2Q8N344 545 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 WFDC11Q8NEX6 87 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 STEAP2Q8NFT2 490 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 WDR60Q8WVS4 1066 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 VPS33AQ96AX1 596 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 S100PBPQ96BU1 408 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 DNAJA3Q96EY1 480 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 AURKBQ96GD4 344 aaPredicted RBP11.62□□□□□ -0.55
SEC22C-209ENST00000449617 ZNF300Q96RE9 604 aaPredicted RBP11.62□□□□□ -0.55
SEC22C-209ENST00000449617 OR10A4Q9H209 315 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 RMND5AQ9H871 391 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 GPR52Q9Y2T5 361 aa11.62□□□□□ -0.55
SEC22C-209ENST00000449617 SPIN1Q9Y657 262 aaPredicted RBP11.62□□□□□ -0.55
SEC22C-209ENST00000449617 ANP32DO95626 131 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 ZCCHC18P0CG32 403 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 ETFAP13804 333 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 CRATP43155 626 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 IDH2P48735 452 aaKnown RBP11.61□□□□□ -0.55
SEC22C-209ENST00000449617 CSNK2A1P68400 391 aaPredicted RBP11.61□□□□□ -0.55
SEC22C-209ENST00000449617 MAPK11Q15759 364 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 ACKR1Q16570 336 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 TTMPQ5BVD1 217 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 C6orf10Q5SRN2 563 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 MRPL2Q5T653 305 aaKnown RBP11.61□□□□□ -0.55
SEC22C-209ENST00000449617 ABLIM2Q6H8Q1 611 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 ALKBH2Q6NS38 261 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 EPGNQ6UW88 154 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 MSANTD1Q6ZTZ1 278 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 KRTAP1-3Q8IUG1 177 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 LRRC8CQ8TDW0 803 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 ZNF775Q96BV0 537 aaPredicted RBP11.61□□□□□ -0.55
SEC22C-209ENST00000449617 ITCHQ96J02 903 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 ARL5BQ96KC2 179 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 ATP6V1G3Q96LB4 118 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 C7orf26Q96N11 449 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 OR11A1Q9GZK7 315 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 MTHFD2LQ9H903 347 aaPredicted RBP11.61□□□□□ -0.55
SEC22C-209ENST00000449617 TPT1P8Q9HAU6 139 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 SLCO1B3Q9NPD5 702 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 P2RX2Q9UBL9 471 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 CADP27708 2225 aa11.61□□□□□ -0.55
SEC22C-209ENST00000449617 FAM234BA2RU67 622 aa11.6□□□□□ -0.55
SEC22C-209ENST00000449617 ZNF814B7Z6K7 855 aa11.6□□□□□ -0.55
SEC22C-209ENST00000449617 ADAP00813 363 aa11.6□□□□□ -0.55
SEC22C-209ENST00000449617 BCHEP06276 602 aa11.6□□□□□ -0.55
SEC22C-209ENST00000449617 DBIP07108 87 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms