RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 A0A1W2PS29 197 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 GLTPD2A6NH11 291 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 ZNF593O00488 134 aaPredicted RBP11.54□□□□□ -0.56
UBE3B-204ENST00000449510 SC5DO75845 299 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 SCGB1D2O95969 90 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 RBMS1P29558 406 aaKnown RBP11.54□□□□□ -0.56
UBE3B-204ENST00000449510 PRKXP51817 358 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 LUMP51884 338 aaPredicted RBP11.54□□□□□ -0.56
UBE3B-204ENST00000449510 CRYBA2P53672 197 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 TEKQ02763 1124 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 AGERQ15109 404 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 TIGD3Q6B0B8 471 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 TMEM81Q6P7N7 255 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 LRFN4Q6PJG9 635 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 FAM111BQ6SJ93 734 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 TMEM17Q86X19 198 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 OR4K14Q8NGD5 310 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 BRIX1Q8TDN6 353 aaKnown RBP11.54□□□□□ -0.56
UBE3B-204ENST00000449510 FATE1Q969F0 183 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 METTL2AQ96IZ6 378 aaKnown RBP11.54□□□□□ -0.56
UBE3B-204ENST00000449510 ZNF514Q96K75 400 aaPredicted RBP11.54□□□□□ -0.56
UBE3B-204ENST00000449510 TMEM168Q9H0V1 697 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 STARD5Q9NSY2 213 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 A4GNTQ9UNA3 340 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 SLC27A6Q9Y2P4 619 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 SGCEO43556 437 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 GMDSO60547 372 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 UBL3O95164 117 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 CBX7O95931 251 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 TPOP07202 933 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 DCNP07585 359 aaKnown RBP11.54□□□□□ -0.56
UBE3B-204ENST00000449510 VIPR2P41587 438 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 VASPP50552 380 aaPredicted RBP11.54□□□□□ -0.56
UBE3B-204ENST00000449510 DLX5P56178 289 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 SREBF2Q12772 1141 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 PUS10Q3MIT2 529 aaKnown RBP11.54□□□□□ -0.56
UBE3B-204ENST00000449510 PARS2Q7L3T8 475 aaKnown RBP11.54□□□□□ -0.56
UBE3B-204ENST00000449510 KCTD20Q7Z5Y7 419 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 GTPBP8Q8N3Z3 284 aaPredicted RBP11.54□□□□□ -0.56
UBE3B-204ENST00000449510 C17orf47Q8NEP4 570 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 OR2T4Q8NH00 348 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 AMDHD1Q96NU7 426 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 PTDSS2Q9BVG9 487 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 PARP12Q9H0J9 701 aaKnown RBP11.54□□□□□ -0.56
UBE3B-204ENST00000449510 LIN7BQ9HAP6 207 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 NEUROG3Q9Y4Z2 214 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 ASB4Q9Y574 426 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 ZNF638Q14966 1978 aaKnown RBP11.54□□□□□ -0.56
UBE3B-204ENST00000449510 CACNA1DQ01668 2161 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 M0QYG6 137 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 KIAA0355O15063 1070 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 SLC25A12O75746 678 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 SLCO2B1O94956 709 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 CYB5AP00167 134 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 TYRP1P17643 537 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 ENPP1P22413 925 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 LSSP48449 732 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 SP3Q02447 781 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 EIPR1Q53HC9 387 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 FAM76BQ5HYJ3 339 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 GAREM2Q75VX8 874 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 GDF7Q7Z4P5 450 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 KIAA1143Q96AT1 154 aaPredicted RBP11.53□□□□□ -0.56
UBE3B-204ENST00000449510 NMNAT3Q96T66 252 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 SPHK2Q9NRA0 654 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 ACTR10Q9NZ32 417 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 Q9Y3F1 56 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 TRAPPC13A5PLN9 417 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 METTL21EPA6NDL7 271 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 LCMT2O60294 686 aaKnown RBP11.53□□□□□ -0.56
UBE3B-204ENST00000449510 ZNF10P21506 573 aaPredicted RBP11.53□□□□□ -0.56
UBE3B-204ENST00000449510 NUDT1P36639 197 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 FGL1Q08830 312 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 MPEG1Q2M385 716 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 MORN1Q5T089 497 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 LEG1Q6P5S2 330 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 OR4Q3Q8NH05 313 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 CD99L2Q8TCZ2 262 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 FBLIM1Q8WUP2 373 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 WDFY2Q96P53 400 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 CNN2Q99439 309 aaKnown RBP11.53□□□□□ -0.56
UBE3B-204ENST00000449510 TEAD3Q99594 435 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 ACSL5Q9ULC5 683 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 DOCK3Q8IZD9 2030 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 SCN2AQ99250 2005 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 B3GALT2O43825 422 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 SFTPBP07988 381 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 PBX2P40425 430 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 EIF2B1Q14232 305 aaKnown RBP11.53□□□□□ -0.56
UBE3B-204ENST00000449510 TPGS2Q68CL5 300 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 GLT8D1Q68CQ7 371 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 Q6ZTK2 550 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 TSEN54Q7Z6J9 526 aaKnown RBP11.53□□□□□ -0.56
UBE3B-204ENST00000449510 KLHDC8BQ8IXV7 354 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 ZNF101Q8IZC7 436 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 CMTM4Q8IZR5 234 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 PHOSPHO1Q8TCT1 267 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 CD300LFQ8TDQ1 290 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 BCL7CQ8WUZ0 217 aaPredicted RBP11.53□□□□□ -0.56
UBE3B-204ENST00000449510 TSSK2Q96PF2 358 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms