RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 ICOSLGO75144 302 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 HIST1H2ABP04908 130 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 NTSP30990 170 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 TSPAN7P41732 249 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 KHKP50053 298 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 MVDP53602 400 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 PDE7AQ13946 482 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 HABP2Q14520 560 aaPredicted RBP12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 GINS1Q14691 196 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 SLC5A12Q1EHB4 618 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 HIST3H2AQ7L7L0 130 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 GNPDA2Q8TDQ7 276 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 HIST1H2ACQ93077 130 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 AIF1LQ9BQI0 150 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 C7orf50Q9BRJ6 194 aaKnown RBP12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 DMRT3Q9NQL9 472 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 ZNF69Q9UC07 566 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 TMEM218A2RU14 115 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 LRIT2A6NDA9 550 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 RFXAPO00287 272 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 ITGA10O75578 1167 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 AKR1C2P52895 323 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 PCBP3P57721 371 aaKnown RBP12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 DCDP81605 110 aaKnown RBP12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 AKR1C1Q04828 323 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 ARSIQ5FYB1 569 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 TCEAL5Q5H9L2 206 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 SLC22A10Q63ZE4 541 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 WRAP53Q9BUR4 548 aaKnown RBP12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 OR10A4Q9H209 315 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 CD84Q9UIB8 345 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 OR10H1Q9Y4A9 318 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 PRAF2O60831 178 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 BCHEP06276 602 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 ACP2P11117 423 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 CELP19835 753 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 SOX18P35713 384 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 UBE2IP63279 158 aaKnown RBP12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 TEX30Q5JUR7 227 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 FAM71E1Q6IPT2 247 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 DPPA4Q7L190 304 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 KCTD12Q96CX2 325 aaKnown RBP12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 IFT27Q9BW83 186 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 ICKQ9UPZ9 632 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 C17orf113A0A1B0GUU1 675 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 PRAMEF25A6NGN4 478 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 RHPN2P1A8MT19 583 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 HMSDA8MTL9 139 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 SH3BGRLO75368 114 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 AQP8O94778 261 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 PAK4O96013 591 aaPredicted RBP12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 WNT1P04628 370 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 NPR2P20594 1047 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 CD96P40200 585 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 GCGRP47871 477 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 DGCR2P98153 550 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 SERPINA13PQ6UXR4 307 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 CD300LDQ6UXZ3 194 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 SLCO4C1Q6ZQN7 724 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 CMIPQ8IY22 773 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 SPICQ8N5J4 248 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 ING5Q8WYH8 240 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 SCAMP4Q969E2 229 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 FBXO17Q96EF6 278 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 NEURL3Q96EH8 262 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 LCORQ96JN0 433 aaPredicted RBP12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 MOGAT1Q96PD6 335 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 GCM2O75603 506 aaPredicted RBP12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 CNR1P21554 472 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 GALP22466 123 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 LIMS1P48059 325 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 TAP2Q03519 686 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 FABP9Q0Z7S8 132 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 ZNF697Q5TEC3 545 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 NHLRC1Q6VVB1 395 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 SKA3Q8IX90 412 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 OR9A1PQ8NGU1 263 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 LRIG1Q96JA1 1093 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 FUZQ9BT04 418 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 FGF20Q9NP95 211 aaPredicted RBP12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 TRPC4Q9UBN4 977 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 IL36AQ9UHA7 158 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 LHX6Q9UPM6 363 aa12.5□□□□□ -0.41
SYNGAP1-204ENST00000449372 OTOL1A6NHN0 477 aaPredicted RBP12.49□□□□□ -0.41
SYNGAP1-204ENST00000449372 UPK3BL1B0FP48 263 aa12.49□□□□□ -0.41
SYNGAP1-204ENST00000449372 UPK3BL2E5RIL1 263 aa12.49□□□□□ -0.41
SYNGAP1-204ENST00000449372 TBX19O60806 448 aa12.49□□□□□ -0.41
SYNGAP1-204ENST00000449372 PRAMEF4O60810 478 aa12.49□□□□□ -0.41
SYNGAP1-204ENST00000449372 EN2P19622 333 aaPredicted RBP12.49□□□□□ -0.41
SYNGAP1-204ENST00000449372 RNF4P78317 190 aa12.49□□□□□ -0.41
SYNGAP1-204ENST00000449372 CHAF1BQ13112 559 aa12.49□□□□□ -0.41
SYNGAP1-204ENST00000449372 MINDY4Q4G0A6 757 aa12.49□□□□□ -0.41
SYNGAP1-204ENST00000449372 ZNF805Q5CZA5 627 aa12.49□□□□□ -0.41
SYNGAP1-204ENST00000449372 PRAMEF9Q5VWM5 478 aa12.49□□□□□ -0.41
SYNGAP1-204ENST00000449372 ZC3H14Q6PJT7 736 aaKnown RBP12.49□□□□□ -0.41
SYNGAP1-204ENST00000449372 NUDT18Q6ZVK8 323 aa12.49□□□□□ -0.41
SYNGAP1-204ENST00000449372 FAM122BQ7Z309 247 aa12.49□□□□□ -0.41
SYNGAP1-204ENST00000449372 SZRD1Q7Z422 152 aa12.49□□□□□ -0.41
SYNGAP1-204ENST00000449372 ARIH2OSQ8N7S6 290 aa12.49□□□□□ -0.41
SYNGAP1-204ENST00000449372 PIGXQ8TBF5 258 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms