RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 PLPPR5Q32ZL2 321 aa17.5■□□□□ 0.39
RPS28-202ENST00000449223 SLC25A25Q6KCM7 469 aa17.5■□□□□ 0.39
RPS28-202ENST00000449223 C1orf94Q6P1W5 598 aa17.5■□□□□ 0.39
RPS28-202ENST00000449223 OR4K17Q8NGC6 315 aa17.5■□□□□ 0.39
RPS28-202ENST00000449223 OR9Q2Q8NGE9 314 aa17.5■□□□□ 0.39
RPS28-202ENST00000449223 TMEM255BQ8WV15 326 aa17.5■□□□□ 0.39
RPS28-202ENST00000449223 TMEM239Q8WW34 195 aa17.5■□□□□ 0.39
RPS28-202ENST00000449223 MRGPRX4Q96LA9 322 aa17.5■□□□□ 0.39
RPS28-202ENST00000449223 FEVQ99581 238 aa17.5■□□□□ 0.39
RPS28-202ENST00000449223 TMEM43Q9BTV4 400 aa17.5■□□□□ 0.39
RPS28-202ENST00000449223 MGAT4BQ9UQ53 548 aa17.5■□□□□ 0.39
RPS28-202ENST00000449223 KLF13Q9Y2Y9 288 aaPredicted RBP17.5■□□□□ 0.39
RPS28-202ENST00000449223 PCDHGB7Q9Y5F8 929 aa17.5■□□□□ 0.39
RPS28-202ENST00000449223 A0A0G2JMM0 328 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 A0A1W2PPB8 328 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 A0A1W2PRS3 328 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 MED19A0JLT2 244 aaPredicted RBP17.49■□□□□ 0.39
RPS28-202ENST00000449223 HTR3EA5X5Y0 456 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 TMEM8BA6NDV4 472 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 KIR3DP1A8MWS1 328 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 TAF4O00268 1085 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 DLGAP1O14490 977 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 OR10H3O60404 316 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 F10P00742 488 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 CD46P15529 392 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 ADH6P28332 368 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 TACR3P29371 465 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 IFNGR2P38484 337 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 MASP1P48740 699 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 ZNF41P51814 821 aaPredicted RBP17.49■□□□□ 0.39
RPS28-202ENST00000449223 POLR2HP52434 150 aaKnown RBP17.49■□□□□ 0.39
RPS28-202ENST00000449223 MAP2K6P52564 334 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 DSCR4P56555 118 aaPredicted RBP17.49■□□□□ 0.39
RPS28-202ENST00000449223 ARG2P78540 354 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 PGBD2Q6P3X8 592 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 BORAQ6PGQ7 559 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 ARSKQ6UWY0 536 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 IZUMO2Q6UXV1 221 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 CD300LDQ6UXZ3 194 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 ZNF730Q6ZMV8 503 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 ZER1Q7Z7L7 766 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 OR2M7Q8NG81 312 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 UBQLN3Q9H347 655 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 OSGIN1Q9UJX0 560 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 MRPS18CQ9Y3D5 142 aaKnown RBP17.49■□□□□ 0.39
RPS28-202ENST00000449223 MGAQ8IWI9 3026 aa17.49■□□□□ 0.39
RPS28-202ENST00000449223 TNRC6AQ8NDV7 1962 aaKnown RBP17.49■□□□□ 0.39
RPS28-202ENST00000449223 GNB5O14775 395 aa17.48■□□□□ 0.39
RPS28-202ENST00000449223 UGT2B15P54855 530 aa17.48■□□□□ 0.39
RPS28-202ENST00000449223 AQP4P55087 323 aa17.48■□□□□ 0.39
RPS28-202ENST00000449223 RFX4Q33E94 735 aa17.48■□□□□ 0.39
RPS28-202ENST00000449223 ATG16L2Q8NAA4 619 aa17.48■□□□□ 0.39
RPS28-202ENST00000449223 MAGEE2Q8TD90 523 aaPredicted RBP17.48■□□□□ 0.39
RPS28-202ENST00000449223 TM9SF4Q92544 642 aa17.48■□□□□ 0.39
RPS28-202ENST00000449223 ZBTB8AQ96BR9 441 aa17.48■□□□□ 0.39
RPS28-202ENST00000449223 DTNBP1Q96EV8 351 aa17.48■□□□□ 0.39
RPS28-202ENST00000449223 ZNF184Q99676 751 aaPredicted RBP17.48■□□□□ 0.39
RPS28-202ENST00000449223 SMURF2Q9HAU4 748 aa17.48■□□□□ 0.39
RPS28-202ENST00000449223 ZFP64Q9NPA5 681 aa17.48■□□□□ 0.39
RPS28-202ENST00000449223 BOKQ9UMX3 212 aaPredicted RBP17.48■□□□□ 0.39
RPS28-202ENST00000449223 C15orf41Q9Y2V0 281 aa17.48■□□□□ 0.39
RPS28-202ENST00000449223 G3V3Y1 287 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 KLF4O43474 513 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 GASTP01350 101 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 ITGB2P05107 769 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 APOBEC1P41238 236 aaKnown RBP17.47■□□□□ 0.39
RPS28-202ENST00000449223 EIF1P41567 113 aaKnown RBP17.47■□□□□ 0.39
RPS28-202ENST00000449223 OMPP47874 163 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 CTBP2P56545 445 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 LSM11P83369 360 aaKnown RBP eCLIP17.47■□□□□ 0.39
RPS28-202ENST00000449223 HYAL4Q2M3T9 481 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 TMEM44Q2T9K0 475 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 GLYR1Q49A26 553 aaPredicted RBP17.47■□□□□ 0.39
RPS28-202ENST00000449223 RRM2BQ7LG56 351 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 SULF2Q8IWU5 870 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 PARP8Q8N3A8 854 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 GALNT4Q8N4A0 578 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 TMEM178AQ8NBL3 297 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 AQP11Q8NBQ7 271 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 PIGXQ8TBF5 258 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 C5orf34Q96MH7 638 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 GNRHR2Q96P88 292 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 KRCC1Q9NPI7 259 aaPredicted RBP17.47■□□□□ 0.39
RPS28-202ENST00000449223 MEPEQ9NQ76 525 aaPredicted RBP17.47■□□□□ 0.39
RPS28-202ENST00000449223 SMPD3Q9NY59 655 aaPredicted RBP17.47■□□□□ 0.39
RPS28-202ENST00000449223 TUBA8Q9NY65 449 aaPredicted RBP17.47■□□□□ 0.39
RPS28-202ENST00000449223 MED31Q9Y3C7 131 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 MPDZO75970 2070 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 IGKV1D-42A0A075B6H8 117 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 ELOA3DA6NLF2 546 aaPredicted RBP17.47■□□□□ 0.39
RPS28-202ENST00000449223 KLRC4-KLRK1H3BQV0 150 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 GMFGO60234 142 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 IGFBP5P24593 272 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 SRD5A2P31213 254 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 HSPA13P48723 471 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 PRKCDQ05655 676 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 COX10Q12887 443 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 ELOA3BQ3SY89 546 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 ZNF766Q5HY98 468 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 TTC33Q6PID6 262 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms