RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 PAQR8Q8TEZ7 354 aa22.62■■□□□ 1.21
RFFL-206ENST00000447669 MED31Q9Y3C7 131 aa22.62■■□□□ 1.21
RFFL-206ENST00000447669 GMPPBQ9Y5P6 360 aa22.62■■□□□ 1.21
RFFL-206ENST00000447669 IGKV1D-42A0A075B6H8 117 aa22.62■■□□□ 1.21
RFFL-206ENST00000447669 KLF4O43474 513 aa22.62■■□□□ 1.21
RFFL-206ENST00000447669 OSMP13725 252 aa22.62■■□□□ 1.21
RFFL-206ENST00000447669 CDH2P19022 906 aaPredicted RBP22.62■■□□□ 1.21
RFFL-206ENST00000447669 PGCP20142 388 aa22.62■■□□□ 1.21
RFFL-206ENST00000447669 CRYZQ08257 329 aaKnown RBP22.62■■□□□ 1.21
RFFL-206ENST00000447669 SLC22A10Q63ZE4 541 aa22.62■■□□□ 1.21
RFFL-206ENST00000447669 KRT80Q6KB66 452 aa22.62■■□□□ 1.21
RFFL-206ENST00000447669 IQCF1Q8N6M8 205 aa22.62■■□□□ 1.21
RFFL-206ENST00000447669 ADAM19Q9H013 955 aa22.62■■□□□ 1.21
RFFL-206ENST00000447669 TAS2R10Q9NYW0 307 aa22.62■■□□□ 1.21
RFFL-206ENST00000447669 OSGIN1Q9UJX0 560 aa22.62■■□□□ 1.21
RFFL-206ENST00000447669 NDRG4Q9ULP0 352 aaKnown RBP22.62■■□□□ 1.21
RFFL-206ENST00000447669 FREM3P0C091 2139 aa22.61■■□□□ 1.21
RFFL-206ENST00000447669 ELOA3DA6NLF2 546 aaPredicted RBP22.61■■□□□ 1.21
RFFL-206ENST00000447669 ELK4P28324 431 aa22.61■■□□□ 1.21
RFFL-206ENST00000447669 CRISP1P54107 249 aa22.61■■□□□ 1.21
RFFL-206ENST00000447669 ELOA3BQ3SY89 546 aa22.61■■□□□ 1.21
RFFL-206ENST00000447669 TTC33Q6PID6 262 aaPredicted RBP22.61■■□□□ 1.21
RFFL-206ENST00000447669 MISPQ8IVT2 679 aa22.61■■□□□ 1.21
RFFL-206ENST00000447669 PARP8Q8N3A8 854 aa22.61■■□□□ 1.21
RFFL-206ENST00000447669 GALNT16Q8N428 558 aa22.61■■□□□ 1.21
RFFL-206ENST00000447669 LINC00471Q8N535 108 aa22.61■■□□□ 1.21
RFFL-206ENST00000447669 ELOA3Q8NG57 546 aa22.61■■□□□ 1.21
RFFL-206ENST00000447669 BPIFA2Q96DR5 249 aa22.61■■□□□ 1.21
RFFL-206ENST00000447669 MPP4Q96JB8 637 aa22.61■■□□□ 1.21
RFFL-206ENST00000447669 JSRP1Q96MG2 331 aaPredicted RBP22.61■■□□□ 1.21
RFFL-206ENST00000447669 MGAQ8IWI9 3026 aa22.61■■□□□ 1.21
RFFL-206ENST00000447669 APC2O95996 2303 aa22.61■■□□□ 1.21
RFFL-206ENST00000447669 PIEZO1Q92508 2521 aa22.6■■□□□ 1.21
RFFL-206ENST00000447669 E9PQ18 207 aa22.6■■□□□ 1.21
RFFL-206ENST00000447669 CD96P40200 585 aa22.6■■□□□ 1.21
RFFL-206ENST00000447669 TPD52P55327 224 aaPredicted RBP22.6■■□□□ 1.21
RFFL-206ENST00000447669 GPR85P60893 370 aa22.6■■□□□ 1.21
RFFL-206ENST00000447669 PRKCDQ05655 676 aa22.6■■□□□ 1.21
RFFL-206ENST00000447669 TSPAN31Q12999 210 aa22.6■■□□□ 1.21
RFFL-206ENST00000447669 CTU2Q2VPK5 515 aaKnown RBP22.6■■□□□ 1.21
RFFL-206ENST00000447669 ZNF691Q5VV52 312 aa22.6■■□□□ 1.21
RFFL-206ENST00000447669 ING2Q9H160 280 aa22.6■■□□□ 1.21
RFFL-206ENST00000447669 ENO4A6NNW6 628 aa22.6■■□□□ 1.21
RFFL-206ENST00000447669 SMNDC1O75940 238 aaKnown RBP eCLIP22.6■■□□□ 1.21
RFFL-206ENST00000447669 GP1BBP13224 206 aa22.6■■□□□ 1.21
RFFL-206ENST00000447669 ENDOUP21128 410 aaKnown RBP22.6■■□□□ 1.21
RFFL-206ENST00000447669 IFNGR2P38484 337 aa22.6■■□□□ 1.21
RFFL-206ENST00000447669 DNASE1L1P49184 302 aa22.6■■□□□ 1.21
RFFL-206ENST00000447669 EGR4Q05215 589 aa22.6■■□□□ 1.21
RFFL-206ENST00000447669 ABHD17BQ5VST6 288 aa22.6■■□□□ 1.21
RFFL-206ENST00000447669 JMJD6Q6NYC1 403 aaPredicted RBP22.6■■□□□ 1.21
RFFL-206ENST00000447669 LRRC17Q8N6Y2 441 aa22.6■■□□□ 1.21
RFFL-206ENST00000447669 OR8D4Q8NGM9 314 aa22.6■■□□□ 1.21
RFFL-206ENST00000447669 OR5M1Q8NGP8 315 aa22.6■■□□□ 1.21
RFFL-206ENST00000447669 GATA6Q92908 595 aa22.6■■□□□ 1.21
RFFL-206ENST00000447669 GNRHR2Q96P88 292 aa22.6■■□□□ 1.21
RFFL-206ENST00000447669 SIGLEC12Q96PQ1 595 aa22.6■■□□□ 1.21
RFFL-206ENST00000447669 RASSF1Q9NS23 344 aa22.6■■□□□ 1.21
RFFL-206ENST00000447669 ANKUB1A6NFN9 424 aa22.59■■□□□ 1.21
RFFL-206ENST00000447669 KLK10O43240 276 aa22.59■■□□□ 1.21
RFFL-206ENST00000447669 SDHBP21912 280 aa22.59■■□□□ 1.21
RFFL-206ENST00000447669 CYB561P49447 251 aa22.59■■□□□ 1.21
RFFL-206ENST00000447669 CLEC12AQ5QGZ9 265 aa22.59■■□□□ 1.21
RFFL-206ENST00000447669 C1QL3Q5VWW1 255 aa22.59■■□□□ 1.21
RFFL-206ENST00000447669 RNF113BQ8IZP6 322 aaKnown RBP22.59■■□□□ 1.21
RFFL-206ENST00000447669 C8orf59Q8N0T1 100 aaPredicted RBP22.59■■□□□ 1.21
RFFL-206ENST00000447669 OR13C2Q8NGS9 318 aa22.59■■□□□ 1.21
RFFL-206ENST00000447669 CNIH3Q8TBE1 160 aa22.59■■□□□ 1.21
RFFL-206ENST00000447669 HRASLS5Q96KN8 279 aa22.59■■□□□ 1.21
RFFL-206ENST00000447669 ANGPTL4Q9BY76 406 aa22.59■■□□□ 1.21
RFFL-206ENST00000447669 ENKD1Q9H0I2 346 aa22.59■■□□□ 1.21
RFFL-206ENST00000447669 ZC3H12DA2A288 527 aaKnown RBP22.58■■□□□ 1.21
RFFL-206ENST00000447669 WDPCPO95876 746 aa22.58■■□□□ 1.21
RFFL-206ENST00000447669 FPR3P25089 353 aa22.58■■□□□ 1.21
RFFL-206ENST00000447669 HLCSP50747 726 aa22.58■■□□□ 1.21
RFFL-206ENST00000447669 ISL1P61371 349 aa22.58■■□□□ 1.21
RFFL-206ENST00000447669 IL5RAQ01344 420 aa22.58■■□□□ 1.21
RFFL-206ENST00000447669 CD47Q08722 323 aa22.58■■□□□ 1.21
RFFL-206ENST00000447669 CD300LDQ6UXZ3 194 aa22.58■■□□□ 1.21
RFFL-206ENST00000447669 OR2M3Q8NG83 312 aa22.58■■□□□ 1.21
RFFL-206ENST00000447669 FGF11Q92914 225 aa22.58■■□□□ 1.21
RFFL-206ENST00000447669 HS6ST2Q96MM7 605 aa22.58■■□□□ 1.21
RFFL-206ENST00000447669 HES7Q9BYE0 225 aa22.58■■□□□ 1.21
RFFL-206ENST00000447669 DEPPQ9NTK1 212 aa22.58■■□□□ 1.21
RFFL-206ENST00000447669 LRFN1Q9P244 771 aa22.58■■□□□ 1.21
RFFL-206ENST00000447669 NCKAP5O14513 1909 aa22.58■■□□□ 1.21
RFFL-206ENST00000447669 TRAV27A0A087WT01 109 aa22.58■■□□□ 1.2
RFFL-206ENST00000447669 SAGP10523 405 aaPredicted RBP22.58■■□□□ 1.2
RFFL-206ENST00000447669 PRKCAP17252 672 aa22.58■■□□□ 1.2
RFFL-206ENST00000447669 CCL11P51671 97 aa22.58■■□□□ 1.2
RFFL-206ENST00000447669 GXYLT1Q4G148 440 aa22.58■■□□□ 1.2
RFFL-206ENST00000447669 SWT1Q5T5J6 900 aaKnown RBP22.58■■□□□ 1.2
RFFL-206ENST00000447669 RTL4Q6ZR62 310 aa22.58■■□□□ 1.2
RFFL-206ENST00000447669 PSD4Q8NDX1 1056 aa22.58■■□□□ 1.2
RFFL-206ENST00000447669 SDHAF3Q9NRP4 125 aa22.58■■□□□ 1.2
RFFL-206ENST00000447669 MED17Q9NVC6 651 aa22.58■■□□□ 1.2
RFFL-206ENST00000447669 GPR83Q9NYM4 423 aa22.58■■□□□ 1.2
RFFL-206ENST00000447669 IL11P20809 199 aa22.57■■□□□ 1.2
RFFL-206ENST00000447669 RBM34P42696 430 aaKnown RBP22.57■■□□□ 1.2
RFFL-206ENST00000447669 CHN2P52757 468 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms