RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 ANKRD20A5PA0PJZ0 165 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 GPR37L1O60883 481 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 KLK3P07288 261 aaPredicted RBP17.81■□□□□ 0.44
HMGA1-205ENST00000447654 ACTR1BP42025 376 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 SPCS3P61009 180 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 RAE1P78406 368 aaKnown RBP17.81■□□□□ 0.44
HMGA1-205ENST00000447654 RPL13AP3Q6NVV1 102 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 PODNL1Q6PEZ8 512 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 APOOLQ6UXV4 268 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 OR2W3Q7Z3T1 314 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 OR2AK2Q8NG84 335 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 LKAAEAR1Q8TD35 194 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 BRIX1Q8TDN6 353 aaKnown RBP17.81■□□□□ 0.44
HMGA1-205ENST00000447654 C15orf40Q8WUR7 153 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 NR4A3Q92570 626 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 ALG14Q96F25 216 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 GINS4Q9BRT9 223 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 TMEM138Q9NPI0 162 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 IL17CQ9P0M4 197 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 UNC80Q8N2C7 3258 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 MYO7AQ13402 2215 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 CHD9Q3L8U1 2897 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 J3QRE1 110 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 PLPP2O43688 288 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 PRKRAO75569 313 aaKnown RBP17.81■□□□□ 0.44
HMGA1-205ENST00000447654 SLC34A2O95436 690 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 GKN3PP0CG01 181 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 ZNF35P13682 527 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 AGAP20933 346 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 ABCD3P28288 659 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 OPRD1P41143 372 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 CSNK1EP49674 416 aaKnown RBP17.81■□□□□ 0.44
HMGA1-205ENST00000447654 ARFIP1P53367 373 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 TAS2R60P59551 318 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 MELKQ14680 651 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 LBHQ53QV2 105 aaPredicted RBP17.81■□□□□ 0.44
HMGA1-205ENST00000447654 MBOAT1Q6ZNC8 495 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 SERPINA9Q86WD7 417 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 APCDD1Q8J025 514 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 GPR32P1Q8NGA4 272 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 OR4K5Q8NGD3 323 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 AUNIPQ9H7T9 357 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 SMCO4Q9NRQ5 59 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 ASH2LQ9UBL3 628 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 C9orf170A2RU37 121 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 GPR37O15354 613 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 BCL2L11O43521 198 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 C8GP07360 202 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 CSF2RAP15509 400 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 MUC1P15941 1255 aaPredicted RBP17.8■□□□□ 0.44
HMGA1-205ENST00000447654 SLC25A35Q3KQZ1 300 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 ZNF813Q6ZN06 617 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 Q6ZNB5 142 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 NUDT18Q6ZVK8 323 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 GAREM2Q75VX8 874 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 SSX9Q7RTT3 188 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 SLC36A1Q7Z2H8 476 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 OSTF1Q92882 214 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 CNTNAP3BQ96NU0 1288 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 SLC12A9Q9BXP2 914 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 MAP4K5Q9Y4K4 846 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 DVL2O14641 736 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 PPM1DO15297 605 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 SLC31A2O15432 143 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 C6orf47O95873 294 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 IGHV2-5P01817 119 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 GJA1P17302 382 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 ANXA7P20073 488 aaKnown RBP17.8■□□□□ 0.44
HMGA1-205ENST00000447654 MAT2AP31153 395 aaKnown RBP17.8■□□□□ 0.44
HMGA1-205ENST00000447654 IFNGR2P38484 337 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 CHIT1Q13231 466 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 TSSK4Q6SA08 328 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 TCEAL8Q8IYN2 117 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 HS6ST3Q8IZP7 471 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 MRPS31Q92665 395 aaKnown RBP17.8■□□□□ 0.44
HMGA1-205ENST00000447654 ARL11Q969Q4 196 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 ECHDC3Q96DC8 303 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 WDR89Q96FK6 387 aaPredicted RBP17.8■□□□□ 0.44
HMGA1-205ENST00000447654 ZC3H10Q96K80 434 aaKnown RBP17.8■□□□□ 0.44
HMGA1-205ENST00000447654 OR1F2PQ96R84 312 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 INPP5EQ9NRR6 644 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 PPP4R1LQ9P1A2 415 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 A4GNTQ9UNA3 340 aa17.8■□□□□ 0.44
HMGA1-205ENST00000447654 WASH3PC4AMC7 463 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 FGF16O43320 207 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 VEGFDO43915 354 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 ICOSLGO75144 302 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 CXCL14O95715 111 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 RNF224P0DH78 156 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 ACRP10323 421 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 LAP3P28838 519 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 CSF2RBP32927 897 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 RAB2AP61019 212 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 LINC00303Q3SY05 128 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 CEACAM19Q7Z692 300 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 OR5M1Q8NGP8 315 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 OR1J4Q8NGS1 313 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 RNASE11Q8TAA1 199 aaKnown RBP17.79■□□□□ 0.44
HMGA1-205ENST00000447654 FCAMRQ8WWV6 532 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 PIGKQ92643 395 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms