RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 MARVELD2Q8N4S9 558 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 SYT14Q8NB59 555 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 CDS1Q92903 461 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 NT5C3BQ969T7 300 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 ACPTQ9BZG2 426 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 TSPAN10Q9H1Z9 355 aaPredicted RBP7.98□□□□□ -1.13
PTPN3-204ENST00000446349 SERINC4A6NH21 518 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 SCAF4O95104 1147 aaKnown RBP7.98□□□□□ -1.13
PTPN3-204ENST00000446349 CAMKMTQ7Z624 323 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 DPPA2Q7Z7J5 298 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 RDH10Q8IZV5 341 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 L3MBTL4Q8NA19 623 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 CNIH4Q9P003 139 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 ANKRD34BA5PLL1 514 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 G3V2L1 256 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 CRTAPO75718 401 aaPredicted RBP7.98□□□□□ -1.13
PTPN3-204ENST00000446349 MAP2K3P46734 347 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 PXNP49023 591 aaPredicted RBP7.98□□□□□ -1.13
PTPN3-204ENST00000446349 GPR50Q13585 617 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 OR1Q1Q15612 314 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 OR8H3Q8N146 312 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 CSNK2A3Q8NEV1 391 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 ARRDC2Q8TBH0 407 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 TMEM100Q9NV29 134 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 SMCHD1A6NHR9 2005 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 KCNK2O95069 426 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 MYF6P23409 242 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 ZNF252P-AS1Q0IIN9 211 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 SCGB2A2Q13296 93 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 GPR18Q14330 331 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 CLECL1Q8IZS7 167 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 FRMD1Q8N878 549 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 CIDECQ96AQ7 238 aaPredicted RBP7.98□□□□□ -1.13
PTPN3-204ENST00000446349 ARRDC3Q96B67 414 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 VN1R3Q9BXE9 311 aa7.98□□□□□ -1.13
PTPN3-204ENST00000446349 TEX10Q9NXF1 929 aaPredicted RBP7.98□□□□□ -1.13
PTPN3-204ENST00000446349 LDB3O75112 727 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 ZNF780AO75290 641 aaPredicted RBP7.97□□□□□ -1.13
PTPN3-204ENST00000446349 ATXN1LP0C7T5 689 aaKnown RBP7.97□□□□□ -1.13
PTPN3-204ENST00000446349 ITGAMP11215 1152 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 HOXC8P31273 242 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 TRHRP34981 398 aaPredicted RBP7.97□□□□□ -1.13
PTPN3-204ENST00000446349 SLC1A3P43003 542 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 Q8N402 240 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 OR5W2Q8NH69 310 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 NDNFQ8TB73 568 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 ADAMTS14Q8WXS8 1223 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 ZC3H10Q96K80 434 aaKnown RBP7.97□□□□□ -1.13
PTPN3-204ENST00000446349 SLC6A7Q99884 636 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 RNF24Q9Y225 148 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 FOXO6A8MYZ6 492 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 IFNA4P05014 189 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 UBCP0CG48 685 aaKnown RBP7.97□□□□□ -1.13
PTPN3-204ENST00000446349 OPRD1P41143 372 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 NTRK2Q16620 822 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 C6orf132Q5T0Z8 1188 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 HBMQ6B0K9 141 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 NAGSQ8N159 534 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 BARD1Q99728 777 aaKnown RBP7.97□□□□□ -1.13
PTPN3-204ENST00000446349 LILRA5A6NI73 299 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 HCRTR1O43613 425 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 AIFM1O95831 613 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 UBBP0CG47 229 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 ARAFP10398 606 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 FNTBP49356 437 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 CTSCP53634 463 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 SLC35D3Q5M8T2 416 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 RPS19BP1Q86WX3 136 aaKnown RBP7.97□□□□□ -1.13
PTPN3-204ENST00000446349 ASCC1Q8N9N2 400 aaKnown RBP7.97□□□□□ -1.13
PTPN3-204ENST00000446349 CORO2AQ92828 525 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 KCTD12Q96CX2 325 aaKnown RBP7.97□□□□□ -1.13
PTPN3-204ENST00000446349 ELF4Q99607 663 aaPredicted RBP7.97□□□□□ -1.13
PTPN3-204ENST00000446349 MS4A8Q9BY19 250 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 CD93Q9NPY3 652 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 KCNIP2Q9NS61 270 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 GLTPQ9NZD2 209 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.97□□□□□ -1.13
PTPN3-204ENST00000446349 IER3IP1Q9Y5U9 82 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 ZSCAN5BA6NJL1 495 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 HTR2AP28223 471 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 LGALS4P56470 323 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 RPS26P62854 115 aaKnown RBP7.97□□□□□ -1.13
PTPN3-204ENST00000446349 HENMT1Q5T8I9 393 aaKnown RBP7.97□□□□□ -1.13
PTPN3-204ENST00000446349 TMEM64Q6YI46 380 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 UTS2BQ765I0 119 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 SLC25A31Q9H0C2 315 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 METTL9Q9H1A3 318 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 M0R233 179 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 MED6O75586 246 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 GLCEO94923 617 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 ARR3P36575 388 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 DLSTP36957 453 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 HTR5AP47898 357 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 EIF2S3LQ2VIR3 472 aaKnown RBP7.97□□□□□ -1.13
PTPN3-204ENST00000446349 WDR53Q7Z5U6 358 aaPredicted RBP7.97□□□□□ -1.13
PTPN3-204ENST00000446349 C1orf87Q8N0U7 546 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 OR56B2PQ8NGI1 322 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 OR6T1Q8NGN1 323 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 ZNF431Q8TF32 576 aaPredicted RBP7.97□□□□□ -1.13
PTPN3-204ENST00000446349 OR5B12Q96R08 314 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms