RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 ZNF559Q9BR84 538 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 SCN2AQ99250 2005 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 AKAP11Q9UKA4 1901 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 HMGB3O15347 200 aaKnown RBP7.38□□□□□ -1.23
SMG1-202ENST00000446231 P2RX1P51575 399 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 B3GLCTQ6Y288 498 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 CD163Q86VB7 1156 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 CAMKVQ8NCB2 501 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 HBA1P69905 142 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 SSX1Q16384 188 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 CLEC9AQ6UXN8 241 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 DUSP18Q8NEJ0 188 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 GLYATL1Q969I3 302 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 SMIM3Q9BZL3 60 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 UMAD1C9J7I0 102 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 FKTNO75072 461 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 NQO2P16083 231 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 PSAPL1Q6NUJ1 521 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 TMEM107Q6UX40 140 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 ZNF417Q8TAU3 575 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 SLC2A12Q8TD20 617 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 GPR148Q8TDV2 347 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 ACSS1Q9NUB1 689 aaPredicted RBP7.37□□□□□ -1.23
SMG1-202ENST00000446231 B3GALT1Q9Y5Z6 326 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 TBC1D3BA6NDS4 549 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 NAGAP17050 411 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 AK4P27144 223 aaPredicted RBP7.37□□□□□ -1.23
SMG1-202ENST00000446231 AOAHP28039 575 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 ZNF610Q8N9Z0 462 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 SUSD6Q92537 303 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 HRASLSQ9HDD0 168 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 TAC3Q9UHF0 121 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 EFCAB7A8K855 629 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 IFNA5P01569 189 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 TUSC1Q2TAM9 212 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 KHSRPQ92945 711 aaKnown RBP eCLIP7.37□□□□□ -1.233e-7■■■■□ 21
SMG1-202ENST00000446231 TRMT61AQ96FX7 289 aaKnown RBP7.37□□□□□ -1.23
SMG1-202ENST00000446231 HHATLQ9HCP6 504 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 NOX4Q9NPH5 578 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 MTMR11A4FU01 709 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 SOX4Q06945 474 aaPredicted RBP7.37□□□□□ -1.23
SMG1-202ENST00000446231 NUP54Q7Z3B4 507 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 OR5AK2Q8NH90 309 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 C2orf15Q8WU43 125 aaKnown RBP7.37□□□□□ -1.23
SMG1-202ENST00000446231 APMAPQ9HDC9 416 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 SPATA6Q9NWH7 488 aaPredicted RBP7.37□□□□□ -1.23
SMG1-202ENST00000446231 BLOC1S5-TXNDC5H3BN57 136 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 UPK1AO00322 258 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 KIAA0907Q7Z7F0 614 aaPredicted RBP7.37□□□□□ -1.23
SMG1-202ENST00000446231 PDLIM5Q96HC4 596 aaKnown RBP7.37□□□□□ -1.23
SMG1-202ENST00000446231 GRHPRQ9UBQ7 328 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 ZNF878C9JN71 531 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 C8orf89P0DMQ9 161 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 ST3GAL2Q16842 350 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 OR52W1Q6IF63 320 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 PRSS45Q7RTY3 260 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 FBXO22Q8NEZ5 403 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 FBLIM1Q8WUP2 373 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 ZNF689Q96CS4 500 aaPredicted RBP7.37□□□□□ -1.23
SMG1-202ENST00000446231 MED13Q9UHV7 2174 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 PRSS23O95084 383 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 HOXA11P31270 313 aaPredicted RBP7.37□□□□□ -1.23
SMG1-202ENST00000446231 IRF3Q14653 427 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 ELFN2Q5R3F8 820 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 PIP5KL1Q5T9C9 394 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 SLC22A25Q6T423 547 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 SLC16A13Q7RTY0 426 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 ZNF679Q8IYX0 411 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 PLPP5Q8NEB5 264 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 SIRT5Q9NXA8 310 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 PRSS21Q9Y6M0 314 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 WASH3PC4AMC7 463 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 PLA2G10O15496 165 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 HERV-K104P61576 105 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 PDE7AQ13946 482 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 OR13C2Q8NGS9 318 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 AP1S3Q96PC3 154 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.37□□□□□ -1.23
SMG1-202ENST00000446231 FRS3O43559 492 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 CCR7P32248 378 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 GGTA1PQ4G0N0 100 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 LPCAT3Q6P1A2 487 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 TFAP2EQ6VUC0 442 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 LRRTM3Q86VH5 581 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 CYB561A3Q8NBI2 242 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 ORAI3Q9BRQ5 295 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 OR10A3P58181 314 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 SLC9A3R2Q15599 337 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 GLYR1Q49A26 553 aaPredicted RBP7.37□□□□□ -1.23
SMG1-202ENST00000446231 FAM180BQ6P0A1 224 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 SLC24A5Q71RS6 500 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 RASGRP3Q8IV61 690 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 NAXEQ8NCW5 288 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 TSPAN10Q9H1Z9 355 aaPredicted RBP7.37□□□□□ -1.23
SMG1-202ENST00000446231 MED20Q9H944 212 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 TCRBV16S1A1N1A0A5B0 115 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 IL5P05113 134 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 HYAL4Q2M3T9 481 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 RNF180Q86T96 592 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 UPRTQ96BW1 309 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms