RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 CT45A2Q5DJT8 189 aa16.4■□□□□ 0.22
CLDN9-201ENST00000445369 ATAD3CQ5T2N8 411 aa16.4■□□□□ 0.22
CLDN9-201ENST00000445369 ARL9Q6T311 187 aa16.4■□□□□ 0.22
CLDN9-201ENST00000445369 Q8N402 240 aa16.4■□□□□ 0.22
CLDN9-201ENST00000445369 ACOT12Q8WYK0 555 aa16.4■□□□□ 0.22
CLDN9-201ENST00000445369 C4orf36Q96KX1 117 aa16.4■□□□□ 0.22
CLDN9-201ENST00000445369 DGAT2Q96PD7 388 aa16.4■□□□□ 0.22
CLDN9-201ENST00000445369 NEK6Q9HC98 313 aa16.4■□□□□ 0.22
CLDN9-201ENST00000445369 B3GAT2Q9NPZ5 323 aa16.4■□□□□ 0.22
CLDN9-201ENST00000445369 MALT1Q9UDY8 824 aa16.4■□□□□ 0.22
CLDN9-201ENST00000445369 CHRNA9Q9UGM1 479 aa16.4■□□□□ 0.22
CLDN9-201ENST00000445369 ADAM30Q9UKF2 790 aa16.4■□□□□ 0.22
CLDN9-201ENST00000445369 SPTBP11277 2137 aa16.4■□□□□ 0.22
CLDN9-201ENST00000445369 SLC19A2O60779 497 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 IFNGP01579 166 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 TRAPPC2P0DI81 140 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 TRAPPC2BP0DI82 140 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 CHRNB1P11230 501 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 KIR2DL3P43628 341 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 CAPZBP47756 277 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 FASLGP48023 281 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 ATP12AP54707 1039 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 PSMD4P55036 377 aaKnown RBP16.39■□□□□ 0.21
CLDN9-201ENST00000445369 TAS2R43P59537 309 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 ACTC1P68032 377 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 ACTA1P68133 377 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 BTG2P78543 158 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 POU4F2Q12837 409 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 TRAM1Q15629 374 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 HBMQ6B0K9 141 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 FAAH2Q6GMR7 532 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 VASH1Q7L8A9 365 aaPredicted RBP16.39■□□□□ 0.21
CLDN9-201ENST00000445369 CMIPQ8IY22 773 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 CADM2Q8N3J6 435 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 OR6C4Q8NGE1 309 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 TCTN2Q96GX1 697 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 ZNF285Q96NJ3 590 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 G6PC3Q9BUM1 346 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 PPIL3Q9H2H8 161 aaKnown RBP16.39■□□□□ 0.21
CLDN9-201ENST00000445369 ERVMER34-1Q9H9K5 563 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 PCDHGB7Q9Y5F8 929 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 HEATR5AQ86XA9 2040 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 KRT8P05787 483 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 GYPBP06028 91 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 DDOSTP39656 456 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 GABRA4P48169 554 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 E2F1Q01094 437 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 IL18Q14116 193 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 COL13A1Q5TAT6 717 aaPredicted RBP16.39■□□□□ 0.21
CLDN9-201ENST00000445369 TRIQKQ629K1 86 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 ZNF486Q96H40 463 aaPredicted RBP16.39■□□□□ 0.21
CLDN9-201ENST00000445369 PGLYRP3Q96LB9 341 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 LRFN5Q96NI6 719 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 ITGB1BP2Q9UKP3 347 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 ERVK-19Q9WJR5 959 aa16.39■□□□□ 0.21
CLDN9-201ENST00000445369 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.38■□□□□ 0.21
CLDN9-201ENST00000445369 HTR3EA5X5Y0 456 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 EFCAB7A8K855 629 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 CLDN4O14493 209 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 SC5DO75845 299 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 FUT7Q11130 342 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 COL19A1Q14993 1142 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 NNATQ16517 81 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 ARL14Q8N4G2 192 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 C17orf47Q8NEP4 570 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 C16orf52Q8NHV5 167 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 SMAP2Q8WU79 429 aaPredicted RBP16.38■□□□□ 0.21
CLDN9-201ENST00000445369 MSANTD3Q96H12 275 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 ST6GAL2Q96JF0 529 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 ERMAPQ96PL5 475 aaPredicted RBP16.38■□□□□ 0.21
CLDN9-201ENST00000445369 UBL7Q96S82 380 aaPredicted RBP16.38■□□□□ 0.21
CLDN9-201ENST00000445369 ZNF576Q9H609 170 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 MARCH7Q9H992 704 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 C2orf42Q9NWW7 574 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 LRIT1Q9P2V4 623 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 RPS6KB2Q9UBS0 482 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 OR2W5A6NFC9 320 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 HMX3A6NHT5 357 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 ZNF749O43361 778 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 NDUFB2O95178 105 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 MAOAP21397 527 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 SHC1P29353 583 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 MAP2K3P46734 347 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 CAPZA2P47755 286 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 GPR143P51810 404 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 OR12D2P58182 307 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 BCL2A1Q16548 175 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 NDUFAF6Q330K2 333 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 SSX6Q7RTT6 188 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 TDHQ8IZJ6 230 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 BCORP1Q8N888 145 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 OR52E2Q8NGJ4 325 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 OR5M3Q8NGP4 307 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 FAM174AQ8TBP5 190 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 ZC3HAV1LQ96H79 300 aaKnown RBP16.38■□□□□ 0.21
CLDN9-201ENST00000445369 ZNF578Q96N58 590 aaPredicted RBP16.38■□□□□ 0.21
CLDN9-201ENST00000445369 TMEM43Q9BTV4 400 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 OR10A5Q9H207 317 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 RNF121Q9H920 327 aa16.38■□□□□ 0.21
CLDN9-201ENST00000445369 MKKSQ9NPJ1 570 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms