RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 SYPP08247 313 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 PVRP15151 417 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 SLC6A9P48067 706 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 SIRPAP78324 504 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 NKX3-2P78367 333 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 Q6ZSR6 202 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 COMMD7Q86VX2 200 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 BEST3Q8N1M1 668 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 SLC43A2Q8N370 569 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 OR4K17Q8NGC6 315 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 ZDHHC1Q8WTX9 485 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 SLC35B4Q969S0 331 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 ABCG4Q9H172 646 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 MLXQ9UH92 298 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 BOLA1Q9Y3E2 137 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 PIAS3Q9Y6X2 628 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 MT-ND4P03905 459 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 CTSLP07711 333 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 CSF1P09603 554 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 HTR3AP46098 478 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 PTH2RP49190 550 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 ATXN7L3Q14CW9 347 aaPredicted RBP15.49■□□□□ 0.07
TCOF1-206ENST00000445265 ASTLQ6HA08 431 aaPredicted RBP15.49■□□□□ 0.07
TCOF1-206ENST00000445265 SYNPRQ8TBG9 265 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 CPNE7Q9UBL6 633 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 MAN2B1O00754 1011 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 IFNA21P01568 189 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 LIM2P55344 173 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 GARNL3Q5VVW2 1013 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 BMFQ96LC9 184 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 TNFRSF13CQ96RJ3 184 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 ERVK-19Q9WJR5 959 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 KIAA0100Q14667 2235 aaKnown RBP15.48■□□□□ 0.07
TCOF1-206ENST00000445265 NPIPB8E9PQR5 432 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 SMAD9O15198 467 aaKnown RBP15.48■□□□□ 0.07
TCOF1-206ENST00000445265 SC5DO75845 299 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 ERCC1P07992 297 aaPredicted RBP15.48■□□□□ 0.07
TCOF1-206ENST00000445265 HMGA2P52926 109 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 GPR50Q13585 617 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 RNASE10Q5GAN6 216 aaKnown RBP15.48■□□□□ 0.07
TCOF1-206ENST00000445265 PDZD9Q8IXQ8 264 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 MNTQ99583 582 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 C8orf33Q9H7E9 229 aaPredicted RBP15.48■□□□□ 0.07
TCOF1-206ENST00000445265 METTL7AQ9H8H3 244 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 POT1Q9NUX5 634 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 FTSJ1Q9UET6 329 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 PLCL2Q9UPR0 1127 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 ZNF281Q9Y2X9 895 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 CDHR4A6H8M9 788 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 SLC9B1P1A6NJY1 282 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 AGAP14A8MT82 685 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 PROS1P07225 676 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 UBL4AP11441 157 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 UGT2B7P16662 529 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 HLA-DMAP28067 261 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 ETV6P41212 452 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 SOX9P48436 509 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 ZNF620Q6ZNG0 422 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 TTLL10Q6ZVT0 673 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 SERPINA12Q8IW75 414 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 SLC52A3Q9NQ40 469 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 KNL1Q8NG31 2342 aa15.48■□□□□ 0.07
TCOF1-206ENST00000445265 PRRT4C9JH25 899 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 CRYZL1O95825 349 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 CHRM4P08173 479 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 SNRPBP14678 240 aaKnown RBP15.47■□□□□ 0.07
TCOF1-206ENST00000445265 YBX1P67809 324 aaKnown RBP15.47■□□□□ 0.07
TCOF1-206ENST00000445265 LYPD4Q6UWN0 246 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 KATNB1Q9BVA0 655 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 SPNS1Q9H2V7 528 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 SYNPO2LQ9H987 977 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 FGF20Q9NP95 211 aaPredicted RBP15.47■□□□□ 0.07
TCOF1-206ENST00000445265 BLACEA4D250 179 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 ZNF878C9JN71 531 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 FBLP22087 321 aaKnown RBP15.47■□□□□ 0.07
TCOF1-206ENST00000445265 RAB2AP61019 212 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 SELENBP1Q13228 472 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 MCATQ8IVS2 390 aaKnown RBP15.47■□□□□ 0.07
TCOF1-206ENST00000445265 SLC2A12Q8TD20 617 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 PHYHIPQ92561 330 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 PRAMEF26H0Y7S4 382 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 DNAJB6O75190 326 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 OR7A10O76100 309 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 VNN2O95498 520 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 ITGA5P08648 1049 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 RAB38P57729 211 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 BTG1P62324 171 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 UBE2NLQ5JXB2 153 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 TMEM151BQ8IW70 566 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 MSLNLQ96KJ4 702 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 INTS14Q96SY0 518 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 MED18Q9BUE0 208 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 KCMF1Q9P0J7 381 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 CBLCQ9ULV8 474 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 RCE1Q9Y256 329 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 RBM7Q9Y580 266 aaKnown RBP15.47■□□□□ 0.07
TCOF1-206ENST00000445265 A0A1B0GWA3 101 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 FNTBP49356 437 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 WBP2NLQ6ICG8 309 aa15.47■□□□□ 0.07
TCOF1-206ENST00000445265 FBXO46Q6PJ61 603 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms