RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 XKRXQ6PP77 449 aa12.71□□□□□ -0.37
SSBP3-208ENST00000444533 GTF2IRD2Q86UP8 949 aa12.71□□□□□ -0.37
SSBP3-208ENST00000444533 OR2V1Q8NHB1 315 aa12.71□□□□□ -0.37
SSBP3-208ENST00000444533 POC1BQ8TC44 478 aa12.71□□□□□ -0.37
SSBP3-208ENST00000444533 DNAJA4Q8WW22 397 aaPredicted RBP12.71□□□□□ -0.37
SSBP3-208ENST00000444533 ASB5Q8WWX0 329 aa12.71□□□□□ -0.37
SSBP3-208ENST00000444533 ZHX1-C8orf76Q96EF9 292 aa12.71□□□□□ -0.37
SSBP3-208ENST00000444533 TPD52L3Q96J77 140 aa12.71□□□□□ -0.37
SSBP3-208ENST00000444533 TUBA1CQ9BQE3 449 aa12.71□□□□□ -0.37
SSBP3-208ENST00000444533 TTYH2Q9BSA4 534 aa12.71□□□□□ -0.37
SSBP3-208ENST00000444533 C1orf21Q9H246 121 aa12.71□□□□□ -0.37
SSBP3-208ENST00000444533 CTPS2Q9NRF8 586 aa12.71□□□□□ -0.37
SSBP3-208ENST00000444533 MAGEL2Q9UJ55 1249 aa12.71□□□□□ -0.37
SSBP3-208ENST00000444533 FREM3P0C091 2139 aa12.71□□□□□ -0.38
SSBP3-208ENST00000444533 TMED7-TICAM2A0A0A6YYA0 188 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 SLC22A20A6NK97 555 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 ELOA3DA6NLF2 546 aaPredicted RBP12.7□□□□□ -0.38
SSBP3-208ENST00000444533 CLCA1A8K7I4 914 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 HSPB2A8KAH6 182 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 TNFSF11O14788 317 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 SEMA7AO75326 666 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 ATP5HO75947 161 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 ZNF682O95780 498 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 LGI1O95970 557 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 FESP07332 822 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 PNMTP11086 282 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 TCN1P20061 433 aaPredicted RBP12.7□□□□□ -0.38
SSBP3-208ENST00000444533 CD247P20963 164 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 PSMA4P25789 261 aaKnown RBP12.7□□□□□ -0.38
SSBP3-208ENST00000444533 TACR3P29371 465 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 ACAA2P42765 397 aaKnown RBP12.7□□□□□ -0.38
SSBP3-208ENST00000444533 CLDN20P56880 219 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 HSPB2Q16082 182 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 DUSP7Q16829 419 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 ELOA3BQ3SY89 546 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 DNAL1Q4LDG9 190 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 CYBRD1Q53TN4 286 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 SYT14P1Q58G82 188 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 RIPPLY2Q5TAB7 128 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 EEF1A1P5Q5VTE0 462 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 OR2A2Q6IF42 318 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 FKBP9P1Q75LS8 142 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 MCEMP1Q8IX19 187 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 RBM15BQ8NDT2 890 aaKnown RBP12.7□□□□□ -0.38
SSBP3-208ENST00000444533 ELOA3Q8NG57 546 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 VANGL1Q8TAA9 524 aaPredicted RBP12.7□□□□□ -0.38
SSBP3-208ENST00000444533 CA5BP1Q8WTZ4 195 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 WNT2BQ93097 391 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 CPNE4Q96A23 557 aaPredicted RBP12.7□□□□□ -0.38
SSBP3-208ENST00000444533 TAMM41Q96BW9 452 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 CCDC120Q96HB5 630 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 ZFP3Q96NJ6 502 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 OR5B2Q96R09 309 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 PRPF19Q9UMS4 504 aaKnown RBP12.7□□□□□ -0.38
SSBP3-208ENST00000444533 SH3GLB1Q9Y371 365 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 TMED7Q9Y3B3 224 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 ZNF175Q9Y473 711 aa12.7□□□□□ -0.38
SSBP3-208ENST00000444533 ADAMDEC1O15204 470 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 GYG2O15488 501 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 ZNF208O43345 1280 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 FRS3O43559 492 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 TPST1O60507 370 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 FMO6PO60774 539 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 UBOX5O94941 541 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 NTN1O95631 604 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 PLGP00747 810 aaPredicted RBP12.69□□□□□ -0.38
SSBP3-208ENST00000444533 OPN1LWP04000 364 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 HSD17B1P14061 328 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 CCNA2P20248 432 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 AGAP20933 346 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 TIMP3P35625 211 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 DLX5P56178 289 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 SELENOWP63302 87 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 BNIP2Q12982 314 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 ALG10BQ5I7T1 473 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 GLYATQ6IB77 296 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 ULK3Q6PHR2 472 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 ZNF808Q8N4W9 903 aaPredicted RBP12.69□□□□□ -0.38
SSBP3-208ENST00000444533 RNF148Q8N7C7 305 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 LSMEM1Q8N8F7 131 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 OR10D3Q8NH80 312 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 OSTF1Q92882 214 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 SLC47A1Q96FL8 570 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 LRRC46Q96FV0 321 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 DMRTA2Q96SC8 542 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 MCHR1Q99705 422 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 EGFL7Q9UHF1 273 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 OSGIN1Q9UJX0 560 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 USP22Q9UPT9 525 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 SAMD4AQ9UPU9 718 aaKnown RBP12.69□□□□□ -0.38
SSBP3-208ENST00000444533 HDGFL3Q9Y3E1 203 aa12.69□□□□□ -0.38
SSBP3-208ENST00000444533 SPENQ96T58 3664 aaKnown RBP12.69□□□□□ -0.38
SSBP3-208ENST00000444533 MYO18BQ8IUG5 2567 aa12.68□□□□□ -0.38
SSBP3-208ENST00000444533 M0R3H8 397 aa12.68□□□□□ -0.38
SSBP3-208ENST00000444533 SULT2B1O00204 365 aa12.68□□□□□ -0.38
SSBP3-208ENST00000444533 ZG16O60844 167 aa12.68□□□□□ -0.38
SSBP3-208ENST00000444533 SERPINA1P01009 418 aa12.68□□□□□ -0.38
SSBP3-208ENST00000444533 GLI4P10075 376 aa12.68□□□□□ -0.38
SSBP3-208ENST00000444533 PRG2P13727 222 aa12.68□□□□□ -0.38
SSBP3-208ENST00000444533 GGT1P19440 569 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms