RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 WFDC11Q8NEX6 87 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 CKAP2Q8WWK9 683 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 VPS33AQ96AX1 596 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 ZNF775Q96BV0 537 aaPredicted RBP9.67□□□□□ -0.86
SF3A1-203ENST00000444440 AURKBQ96GD4 344 aaPredicted RBP9.67□□□□□ -0.86
SF3A1-203ENST00000444440 ARL5BQ96KC2 179 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 ALPK1Q96QP1 1244 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 OR5B2Q96R09 309 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 PSD2Q9BQI7 771 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 SLC39A3Q9BRY0 314 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 CCDC106Q9BWC9 280 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 CTPS2Q9NRF8 586 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 ZIM2Q9NZV7 527 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 KLHL13Q9P2N7 655 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 NF1P21359 2839 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 RFXANKO14593 260 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 CASKO14936 926 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 RAMP1O60894 148 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 ETFAP13804 333 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 PGCP20142 388 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 RAC3P60763 192 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 IRX1P78414 480 aaPredicted RBP9.66□□□□□ -0.86
SF3A1-203ENST00000444440 KCNJ10P78508 379 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 TXNL4AP83876 142 aaKnown RBP9.66□□□□□ -0.86
SF3A1-203ENST00000444440 MERTKQ12866 999 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 KEAP1Q14145 624 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 RPS26P11Q5JNZ5 115 aaPredicted RBP9.66□□□□□ -0.86
SF3A1-203ENST00000444440 PDSS1Q5T2R2 415 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 SEZ6L2Q6UXD5 910 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 EIF3MQ7L2H7 374 aaKnown RBP9.66□□□□□ -0.86
SF3A1-203ENST00000444440 ADGRG3Q86Y34 549 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 GABRG1Q8N1C3 465 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 ARFGAP2Q8N6H7 521 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 ST8SIA1Q92185 356 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 TRNT1Q96Q11 434 aaKnown RBP9.66□□□□□ -0.86
SF3A1-203ENST00000444440 EBF4Q9BQW3 602 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 CCDC28BQ9BUN5 200 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 RSPO3Q9BXY4 272 aaPredicted RBP9.66□□□□□ -0.86
SF3A1-203ENST00000444440 OR11A1Q9GZK7 315 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 ACTR6Q9GZN1 396 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 RMND5AQ9H871 391 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 TCF7L2Q9NQB0 619 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 DLL4Q9NR61 685 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 POLE3Q9NRF9 147 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 SDR39U1Q9NRG7 319 aaPredicted RBP9.66□□□□□ -0.86
SF3A1-203ENST00000444440 GLRX2Q9NS18 164 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 ACER3Q9NUN7 267 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 PRSS50Q9UI38 385 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 CHST2Q9Y4C5 530 aa9.66□□□□□ -0.86
SF3A1-203ENST00000444440 SETD2Q9BYW2 2564 aaPredicted RBP9.66□□□□□ -0.86
SF3A1-203ENST00000444440 CHD3Q12873 2000 aaKnown RBP9.65□□□□□ -0.86
SF3A1-203ENST00000444440 DSPPQ9NZW4 1301 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.65□□□□□ -0.86
SF3A1-203ENST00000444440 AGAP5A6NIR3 686 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 GJE1A6NN92 205 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 CYTIPO60759 359 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 SASH3O75995 380 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 PRKD3O94806 890 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 ANP32DO95626 131 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 FESP07332 822 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 NUDT7P0C024 238 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 SLC7A1P30825 629 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 NTF4P34130 210 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 DIO1P49895 249 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 IDH3AP50213 366 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 POLR2JP52435 117 aaKnown RBP9.65□□□□□ -0.86
SF3A1-203ENST00000444440 AQP5P55064 265 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 RNPS1Q15287 305 aaKnown RBP9.65□□□□□ -0.86
SF3A1-203ENST00000444440 SYT14P1Q58G82 188 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 LRRC74BQ6ZQY2 392 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 MSANTD1Q6ZTZ1 278 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 BEND4Q6ZU67 534 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 VRK2Q86Y07 508 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 FUNDC1Q8IVP5 155 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 C10orf111Q8N326 155 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 S100PBPQ96BU1 408 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 ITCHQ96J02 903 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 PAIP1Q9H074 479 aaKnown RBP9.65□□□□□ -0.86
SF3A1-203ENST00000444440 UBTD1Q9HAC8 227 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 BCO1Q9HAY6 547 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 SLC52A3Q9NQ40 469 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 EXOSC3Q9NQT5 275 aaKnown RBP9.65□□□□□ -0.86
SF3A1-203ENST00000444440 RLIMQ9NVW2 624 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 ZNF226Q9NYT6 803 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 SLC35A3Q9Y2D2 325 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 USF3Q68DE3 2245 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 MTORP42345 2549 aa9.65□□□□□ -0.86
SF3A1-203ENST00000444440 YLPM1P49750 1951 aaKnown RBP9.64□□□□□ -0.87
SF3A1-203ENST00000444440 ZANQ9Y493 2812 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 ZC3H12DA2A288 527 aaKnown RBP9.64□□□□□ -0.87
SF3A1-203ENST00000444440 FAM234BA2RU67 622 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 ZNF716A6NP11 495 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 ATP8B1O43520 1251 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 KRT75O95678 551 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 BCHEP06276 602 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 YES1P07947 543 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 GKN3PP0CG01 181 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 NR2F1P10589 423 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 CD99P14209 185 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 CCNA2P20248 432 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms