RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 CLEC4FQ8N1N0 589 aa10.45□□□□□ -0.74
TTC28-203ENST00000442232 UBE2J2Q8N2K1 259 aa10.45□□□□□ -0.74
TTC28-203ENST00000442232 CIARTQ8N365 385 aaPredicted RBP10.45□□□□□ -0.74
TTC28-203ENST00000442232 ARFGAP2Q8N6H7 521 aa10.45□□□□□ -0.74
TTC28-203ENST00000442232 PIGXQ8TBF5 258 aa10.45□□□□□ -0.74
TTC28-203ENST00000442232 RAB3IL1Q8TBN0 382 aa10.45□□□□□ -0.74
TTC28-203ENST00000442232 ROPN1LQ96C74 230 aa10.45□□□□□ -0.74
TTC28-203ENST00000442232 PAIP2Q9BPZ3 127 aaKnown RBP10.45□□□□□ -0.74
TTC28-203ENST00000442232 SLC35A5Q9BS91 424 aa10.45□□□□□ -0.74
TTC28-203ENST00000442232 SERHL2Q9H4I8 314 aa10.45□□□□□ -0.74
TTC28-203ENST00000442232 SSU72Q9NP77 194 aaKnown RBP10.45□□□□□ -0.74
TTC28-203ENST00000442232 KCNK9Q9NPC2 374 aa10.45□□□□□ -0.74
TTC28-203ENST00000442232 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.45□□□□□ -0.74
TTC28-203ENST00000442232 ZNF701Q9NV72 531 aaPredicted RBP10.45□□□□□ -0.74
TTC28-203ENST00000442232 FAIMQ9NVQ4 179 aa10.45□□□□□ -0.74
TTC28-203ENST00000442232 MARCOQ9UEW3 520 aaPredicted RBP10.45□□□□□ -0.74
TTC28-203ENST00000442232 CHRNA9Q9UGM1 479 aa10.45□□□□□ -0.74
TTC28-203ENST00000442232 PRR14LQ5THK1 2151 aa10.45□□□□□ -0.74
TTC28-203ENST00000442232 TLN2Q9Y4G6 2542 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 E9PBE3 544 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 GPR171O14626 319 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 SMAD9O15198 467 aaKnown RBP10.44□□□□□ -0.74
TTC28-203ENST00000442232 GUSBP08236 651 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 GGT1P19440 569 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 S100A3P33764 101 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 RYKP34925 604 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 IDUAP35475 653 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 HTR3AP46098 478 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 TXNL4AP83876 142 aaKnown RBP10.44□□□□□ -0.74
TTC28-203ENST00000442232 BSPH1Q075Z2 132 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 STX3Q13277 289 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 ZNF672Q499Z4 452 aaPredicted RBP10.44□□□□□ -0.74
TTC28-203ENST00000442232 SAXO2Q658L1 398 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 HEPHL1Q6MZM0 1159 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 TMPPEQ6ZT21 453 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 GRINAQ7Z429 371 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 CROCCP2Q86T23 111 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 P2RY8Q86VZ1 359 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 MREGQ8N565 214 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 PIWIL2Q8TC59 973 aaKnown RBP10.44□□□□□ -0.74
TTC28-203ENST00000442232 SMAP2Q8WU79 429 aaPredicted RBP10.44□□□□□ -0.74
TTC28-203ENST00000442232 RAB8BQ92930 207 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 NEURL3Q96EH8 262 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 ZNF300Q96RE9 604 aaPredicted RBP10.44□□□□□ -0.74
TTC28-203ENST00000442232 ZBTB18Q99592 522 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 NUF2Q9BZD4 464 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 PRSS50Q9UI38 385 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 NOSIPQ9Y314 301 aaKnown RBP10.44□□□□□ -0.74
TTC28-203ENST00000442232 HDGFL3Q9Y3E1 203 aa10.44□□□□□ -0.74
TTC28-203ENST00000442232 CENPVL1A0A0U1RR11 272 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 CIB4A0PJX0 185 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 CCT8L1PA6NM43 557 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 ESPNB1AK53 854 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 C9JVG2 144 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 DNPH1O43598 174 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 DNAJA2O60884 412 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 BGNP21810 368 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 PGM1P36871 562 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 MAGEA8P43361 318 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 CLK1P49759 484 aaKnown RBP10.43□□□□□ -0.74
TTC28-203ENST00000442232 CDH11P55287 796 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 LRRC74AQ0VAA2 488 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 CLEC12BQ2HXU8 276 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 FAM174BQ3ZCQ3 159 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 SPANXN4Q5MJ08 99 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 TIMM23BQ5SRD1 257 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 HHATQ5VTY9 493 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 ABLIM2Q6H8Q1 611 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 TYW3Q6IPR3 259 aaKnown RBP10.43□□□□□ -0.74
TTC28-203ENST00000442232 KLHL17Q6TDP4 642 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 OLIG3Q7RTU3 272 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.43□□□□□ -0.74
TTC28-203ENST00000442232 MTDHQ86UE4 582 aaKnown RBP10.43□□□□□ -0.74
TTC28-203ENST00000442232 KBTBD8Q8NFY9 601 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 IGFBPL1Q8WX77 278 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 APH1AQ96BI3 265 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 ZNF775Q96BV0 537 aaPredicted RBP10.43□□□□□ -0.74
TTC28-203ENST00000442232 DDIT4LQ96D03 193 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 HS6ST2Q96MM7 605 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 PANX1Q96RD7 426 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 MEAF6Q9HAF1 191 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 CACYBPQ9HB71 228 aaKnown RBP10.43□□□□□ -0.74
TTC28-203ENST00000442232 BARX1Q9HBU1 254 aaPredicted RBP10.43□□□□□ -0.74
TTC28-203ENST00000442232 EXOSC3Q9NQT5 275 aaKnown RBP10.43□□□□□ -0.74
TTC28-203ENST00000442232 CTPS2Q9NRF8 586 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.43□□□□□ -0.74
TTC28-203ENST00000442232 KCNE5Q9UJ90 142 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 LIPT1Q9Y234 373 aa10.43□□□□□ -0.74
TTC28-203ENST00000442232 V9GYY5 206 aaPredicted RBP10.43□□□□□ -0.74
TTC28-203ENST00000442232 ZNF814B7Z6K7 855 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 PMS2P2O95744 297 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 TP53P04637 393 aaPredicted RBP10.42□□□□□ -0.74
TTC28-203ENST00000442232 NME5P56597 212 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 OR2B6P58173 313 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 FAPQ12884 760 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 CASP8Q14790 479 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 PDK3Q15120 406 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 MAPK14Q16539 360 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 CEP85LQ5SZL2 805 aa10.42□□□□□ -0.74
TTC28-203ENST00000442232 TMEM108Q6UXF1 575 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms