RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 MERTKQ12866 999 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 TNK1Q13470 666 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 MAPK14Q16539 360 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 CARTPTQ16568 116 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 DECR1Q16698 335 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 COLEC12Q5KU26 742 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 HES3Q5TGS1 186 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 PLEKHM3Q6ZWE6 761 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 CREB3L2Q70SY1 520 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 SLC29A4Q7RTT9 530 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 ZAR1Q86SH2 424 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 ZNF605Q86T29 641 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 ZBTB46Q86UZ6 589 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 DHRSXQ8N5I4 330 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 OR52J3Q8NH60 311 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 LCORQ96JN0 433 aaPredicted RBP7.45□□□□□ -1.22
CCDC39-201ENST00000442201 LPAR4Q99677 370 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 BARD1Q99728 777 aaKnown RBP7.45□□□□□ -1.22
CCDC39-201ENST00000442201 ARHGDIGQ99819 225 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 WFDC6Q9BQY6 131 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 SEC22CQ9BRL7 303 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 ADI1Q9BV57 179 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 DDA1Q9BW61 102 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 NXF5Q9H1B4 397 aaKnown RBP7.45□□□□□ -1.22
CCDC39-201ENST00000442201 NMNAT1Q9HAN9 279 aaPredicted RBP7.45□□□□□ -1.22
CCDC39-201ENST00000442201 ACER3Q9NUN7 267 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 KCND3Q9UK17 655 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 GRIP1Q9Y3R0 1128 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 CENPVL1A0A0U1RR11 272 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 F8W036 122 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 H1F0P07305 194 aaKnown RBP7.44□□□□□ -1.22
CCDC39-201ENST00000442201 F8A1P23610 371 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 HMGA2P52926 109 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 PSMD4P55036 377 aaKnown RBP7.44□□□□□ -1.22
CCDC39-201ENST00000442201 EPS8Q12929 822 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 GALEQ14376 348 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 NCF4Q15080 339 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 EBPQ15125 230 aaKnown RBP7.44□□□□□ -1.22
CCDC39-201ENST00000442201 RFX4Q33E94 735 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 ARMC4Q5T2S8 1044 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 TMEM164Q5U3C3 297 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 PAPD4Q6PIY7 484 aaKnown RBP7.44□□□□□ -1.22
CCDC39-201ENST00000442201 FAM198BQ6UWH4 519 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 ZNF517Q6ZMY9 492 aaPredicted RBP7.44□□□□□ -1.22
CCDC39-201ENST00000442201 ZNF836Q6ZNA1 936 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 PRSS48Q7RTY5 328 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 GPAT4Q86UL3 456 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 ZNF786Q8N393 782 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 ZNF614Q8N883 585 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 BCORP1Q8N888 145 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 ATG16L2Q8NAA4 619 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 DEFB124Q8NES8 71 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 B3GNT7Q8NFL0 401 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 HTRA1Q92743 480 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 YIPF5Q969M3 257 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 MNTQ99583 582 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 GAL3ST1Q99999 423 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 IFT46Q9NQC8 304 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 RLIMQ9NVW2 624 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 PAK1IP1Q9NWT1 392 aaPredicted RBP7.44□□□□□ -1.22
CCDC39-201ENST00000442201 RHCGQ9UBD6 479 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 KCNE5Q9UJ90 142 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 MRTO4Q9UKD2 239 aaKnown RBP7.44□□□□□ -1.22
CCDC39-201ENST00000442201 CHST2Q9Y4C5 530 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 FRG2CA6NGY1 282 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 CLDN24A6NM45 220 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 AP3D1O14617 1153 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 FFAR1O14842 300 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 FRS3O43559 492 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 SEMA7AO75326 666 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 IGKV1D-16P01601 117 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 IGFBP5P24593 272 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 POLR2IP36954 125 aaKnown RBP7.44□□□□□ -1.22
CCDC39-201ENST00000442201 EEF1A1P68104 462 aaKnown RBP7.44□□□□□ -1.22
CCDC39-201ENST00000442201 PIN1Q13526 163 aaPredicted RBP7.44□□□□□ -1.22
CCDC39-201ENST00000442201 CTF1Q16619 201 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.44□□□□□ -1.22
CCDC39-201ENST00000442201 EXOC3L2Q2M3D2 409 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 MRPL2Q5T653 305 aaKnown RBP7.44□□□□□ -1.22
CCDC39-201ENST00000442201 TMEM205Q6UW68 189 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 CPEB2Q7Z5Q1 589 aaKnown RBP7.44□□□□□ -1.22
CCDC39-201ENST00000442201 OR4C15Q8NGM1 316 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 CYGBQ8WWM9 190 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 NR4A3Q92570 626 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 PRRC1Q96M27 445 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 FNDC11Q9BVV2 318 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 PADI1Q9ULC6 663 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 PTRH2Q9Y3E5 179 aaKnown RBP7.44□□□□□ -1.22
CCDC39-201ENST00000442201 PMF1-BGLAPU3KQ54 211 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.44□□□□□ -1.22
CCDC39-201ENST00000442201 A0A1B0GWJ7 208 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 CLN5O75503 358 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 CD63P08962 238 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 CCNYL3P0C7X3 344 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 IL7P13232 177 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 CD53P19397 219 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 GPR143P51810 404 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 ATP12AP54707 1039 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 MICAQ29983 383 aa7.44□□□□□ -1.22
CCDC39-201ENST00000442201 ZIK1Q3SY52 487 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms