RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 PATE3B3GLJ2 98 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 PRR23D1E9PI22 279 aaPredicted RBP12.07□□□□□ -0.48
CPSF4-206ENST00000441580 CDC40O60508 579 aaKnown RBP eCLIP12.07□□□□□ -0.48
CPSF4-206ENST00000441580 TECTAO75443 2155 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 OR7A10O76100 309 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 TIAF1O95411 115 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 IGHA1P01876 353 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 ADRA2AP08913 450 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 PRR23D2P0DMB1 279 aaPredicted RBP12.07□□□□□ -0.48
CPSF4-206ENST00000441580 CAPZA2P47755 286 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 GAS1P54826 345 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 POU4F2Q12837 409 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 ISXQ2M1V0 245 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 RTL4Q6ZR62 310 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 BCDIN3DQ7Z5W3 292 aaKnown RBP12.07□□□□□ -0.48
CPSF4-206ENST00000441580 ATG4DQ86TL0 474 aaPredicted RBP12.07□□□□□ -0.48
CPSF4-206ENST00000441580 AMER2Q8N7J2 671 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 GATSQ8NAP1 163 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 OR8K3Q8NH51 312 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 OR52N1Q8NH53 320 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 GPX7Q96SL4 187 aaPredicted RBP12.07□□□□□ -0.48
CPSF4-206ENST00000441580 ADOQ96SZ5 270 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 SH3GL3Q99963 347 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 GTPBP2Q9BX10 602 aaKnown RBP12.07□□□□□ -0.48
CPSF4-206ENST00000441580 MCCC2Q9HCC0 563 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 OSGIN1Q9UJX0 560 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 EXOGQ9Y2C4 368 aaKnown RBP12.07□□□□□ -0.48
CPSF4-206ENST00000441580 PCDHGB6Q9Y5F9 930 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 PCDHGA5Q9Y5G8 931 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 UNC13CQ8NB66 2214 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 FLRT2O43155 660 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 AKAP8O43823 692 aaKnown RBP12.06□□□□□ -0.48
CPSF4-206ENST00000441580 PTP4A3O75365 173 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 RFPL3O75679 317 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 NADKO95544 446 aaPredicted RBP12.06□□□□□ -0.48
CPSF4-206ENST00000441580 HK1P19367 917 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 PGCP20142 388 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 ABCD3P28288 659 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 EVI2BP34910 448 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 MPLP40238 635 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 TMED10P49755 219 aaKnown RBP12.06□□□□□ -0.48
CPSF4-206ENST00000441580 EMP2P54851 167 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 SUMO3P55854 103 aaPredicted RBP12.06□□□□□ -0.48
CPSF4-206ENST00000441580 PRPS1P60891 318 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 LSM3P62310 102 aaKnown RBP12.06□□□□□ -0.48
CPSF4-206ENST00000441580 RPS4XP62701 263 aaKnown RBP12.06□□□□□ -0.48
CPSF4-206ENST00000441580 FOXK2Q01167 660 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 ZNF829Q3KNS6 432 aaPredicted RBP12.06□□□□□ -0.48
CPSF4-206ENST00000441580 LCN1P1Q5VSP4 162 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 PAPD4Q6PIY7 484 aaKnown RBP12.06□□□□□ -0.48
CPSF4-206ENST00000441580 ATCAYQ86WG3 371 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 PRR22Q8IZ63 422 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 KLHL36Q8N4N3 616 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 OR2I1PQ8NGU4 316 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 UFD1Q92890 307 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 RPL3LQ92901 407 aaKnown RBP12.06□□□□□ -0.48
CPSF4-206ENST00000441580 LPAR4Q99677 370 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 CRB3Q9BUF7 120 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 HMG20AQ9NP66 347 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 STUB1Q9UNE7 303 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 CARD8Q9Y2G2 431 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 SLC6A5Q9Y345 797 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 ASXL3Q9C0F0 2248 aa12.06□□□□□ -0.48
CPSF4-206ENST00000441580 LOC100506127A0A0U1RQW1 187 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 C9J4A7 227 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 NDUFB5O43674 189 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 IDH3BO43837 385 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 PPP1R3DO95685 299 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 INHBBP09529 407 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 TSPAN19P0C672 248 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 SP9P0CG40 484 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 PEPDP12955 493 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 ACP1P24666 158 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 PSMA1P25786 263 aaKnown RBP12.05□□□□□ -0.48
CPSF4-206ENST00000441580 NOS3P29474 1203 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 ETV5P41161 510 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 SLC1A3P43003 542 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 ENTPD1P49961 510 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 ETV1P50549 477 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 SLC26A5P58743 744 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 ACTC1P68032 377 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 ACTA1P68133 377 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 RNF4P78317 190 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 BDH1Q02338 343 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 ZNF117Q03924 483 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 ZFP36L1Q07352 338 aaKnown RBP12.05□□□□□ -0.48
CPSF4-206ENST00000441580 CBFBQ13951 182 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 ZNF846Q147U1 533 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 SSX1Q16384 188 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 PLBD1Q6P4A8 553 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 THSD4Q6ZMP0 1018 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 DPY19L2P2Q6ZN68 376 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 MEPCEQ7L2J0 689 aaKnown RBP12.05□□□□□ -0.48
CPSF4-206ENST00000441580 LAPTM4BQ86VI4 370 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 CPOQ8IVL8 374 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 CACTIN-AS1Q8N1I8 211 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 NFAM1Q8NET5 270 aaPredicted RBP12.05□□□□□ -0.48
CPSF4-206ENST00000441580 OR5L2Q8NGL0 311 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 OR51A7Q8NH64 312 aa12.05□□□□□ -0.48
CPSF4-206ENST00000441580 ZNF563Q8TA94 476 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms