RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 SNRPD2P62316 118 aaKnown RBP10.89□□□□□ -0.67
CCBE1-202ENST00000439986 TMEM69Q5SWH9 247 aa10.89□□□□□ -0.67
CCBE1-202ENST00000439986 VWA1Q6PCB0 445 aa10.89□□□□□ -0.67
CCBE1-202ENST00000439986 ASPGQ86U10 573 aa10.89□□□□□ -0.67
CCBE1-202ENST00000439986 TMPRSS12Q86WS5 348 aa10.89□□□□□ -0.67
CCBE1-202ENST00000439986 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.89□□□□□ -0.67
CCBE1-202ENST00000439986 C22orf15Q8WYQ4 148 aa10.89□□□□□ -0.67
CCBE1-202ENST00000439986 NELL2Q99435 816 aa10.89□□□□□ -0.67
CCBE1-202ENST00000439986 IL37Q9NZH6 218 aa10.89□□□□□ -0.67
CCBE1-202ENST00000439986 RPLP1P05386 114 aaKnown RBP10.88□□□□□ -0.67
CCBE1-202ENST00000439986 ITGAMP11215 1152 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 RHCEP18577 417 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 S1PR1P21453 382 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 MRPL49Q13405 166 aaKnown RBP10.88□□□□□ -0.67
CCBE1-202ENST00000439986 PAQR9Q6ZVX9 377 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 RELL2Q8NC24 303 aaPredicted RBP10.88□□□□□ -0.67
CCBE1-202ENST00000439986 OR9Q2Q8NGE9 314 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 FAM3CQ92520 227 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 LRR1Q96L50 414 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 STARD5Q9NSY2 213 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 TAS2R3Q9NYW6 316 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 ARL6IP5O75915 188 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 SEC14L2O76054 403 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 CD3GP09693 182 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 CRYZQ08257 329 aaKnown RBP10.88□□□□□ -0.67
CCBE1-202ENST00000439986 HNRNPA1L2Q32P51 320 aaKnown RBP10.88□□□□□ -0.67
CCBE1-202ENST00000439986 TMEM41BQ5BJD5 291 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 PRAMEF5Q5TYX0 476 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 AGAP6Q5VW22 663 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 PRAMEF9Q5VWM5 478 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 PRAMEF6Q5VXH4 476 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 KIAA1211LQ6NV74 962 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 ASCL4Q6XD76 172 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 RBM45Q8IUH3 476 aaKnown RBP10.88□□□□□ -0.67
CCBE1-202ENST00000439986 AGAP4Q96P64 663 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 PITX2Q99697 317 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 CXCL16Q9H2A7 254 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 ZNF442Q9H7R0 627 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 FAM206AQ9NX38 181 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 GNG13Q9P2W3 67 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 GGT3PA6NGU5 568 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 EPCAMP16422 314 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 ZNF30P17039 623 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 UQCRFS1P47985 274 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 BLOC1S1P78537 153 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 RNF111Q6ZNA4 994 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 ZNF454Q8N9F8 522 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 MITD1Q8WV92 249 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 MROQ9BYG7 248 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 MMP28Q9H239 520 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 HELTA6NFD8 242 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 SH2D7A6NKC9 451 aaPredicted RBP10.88□□□□□ -0.67
CCBE1-202ENST00000439986 CALCRP30988 508 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 MZT1Q08AG7 82 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 CES4AQ5XG92 561 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 SLC27A4Q6P1M0 643 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 ZNF550Q7Z398 422 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 MEX3DQ86XN8 651 aaKnown RBP10.88□□□□□ -0.67
CCBE1-202ENST00000439986 KLBQ86Z14 1044 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 FAM46AQ96IP4 442 aaKnown RBP10.88□□□□□ -0.67
CCBE1-202ENST00000439986 ZNF583Q96ND8 569 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 F2RL3Q96RI0 385 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 POTEKPQ9BYX7 375 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 C1GALT1Q9NS00 363 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 POT1Q9NUX5 634 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 A0A1W2PQL4 384 aaPredicted RBP10.88□□□□□ -0.67
CCBE1-202ENST00000439986 EEF1E1-BLOC1S5C9J1V9 151 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 H7C417 338 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 SLC17A3O00476 420 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 ARPC3O15145 178 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 SOCS5O75159 536 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 CA3P07451 260 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 PMCHP20382 165 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 KCNC1P48547 511 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 MEOX2P50222 304 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 SQSTM1Q13501 440 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 PRR22Q8IZ63 422 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 PARP16Q8N5Y8 322 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 MDGA1Q8NFP4 955 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 SGCZQ96LD1 299 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 SCP2D1Q9UJQ7 156 aa10.88□□□□□ -0.67
CCBE1-202ENST00000439986 LOC285095A0A1B0GVY8 99 aa10.87□□□□□ -0.67
CCBE1-202ENST00000439986 JRKO75564 520 aa10.87□□□□□ -0.67
CCBE1-202ENST00000439986 SDC1P18827 310 aa10.87□□□□□ -0.67
CCBE1-202ENST00000439986 PEA15Q15121 130 aa10.87□□□□□ -0.67
CCBE1-202ENST00000439986 ZNF546Q86UE3 836 aa10.87□□□□□ -0.67
CCBE1-202ENST00000439986 OR6S1Q8NH40 331 aa10.87□□□□□ -0.67
CCBE1-202ENST00000439986 ARRDC2Q8TBH0 407 aa10.87□□□□□ -0.67
CCBE1-202ENST00000439986 C16orf58Q96GQ5 468 aa10.87□□□□□ -0.67
CCBE1-202ENST00000439986 ABCG5Q9H222 651 aa10.87□□□□□ -0.67
CCBE1-202ENST00000439986 NELFAQ9H3P2 528 aa10.87□□□□□ -0.67
CCBE1-202ENST00000439986 CLMPQ9H6B4 373 aa10.87□□□□□ -0.67
CCBE1-202ENST00000439986 SLC2A4RGQ9NR83 387 aa10.87□□□□□ -0.67
CCBE1-202ENST00000439986 A0A1W2PPQ1 181 aa10.87□□□□□ -0.67
CCBE1-202ENST00000439986 SERPINE3A8MV23 424 aa10.87□□□□□ -0.67
CCBE1-202ENST00000439986 ANXA3P12429 323 aa10.87□□□□□ -0.67
CCBE1-202ENST00000439986 CTRB1P17538 263 aa10.87□□□□□ -0.67
CCBE1-202ENST00000439986 CTRB2Q6GPI1 263 aa10.87□□□□□ -0.67
CCBE1-202ENST00000439986 SHISA6Q6ZSJ9 500 aa10.87□□□□□ -0.67
CCBE1-202ENST00000439986 RAB7BQ96AH8 199 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms