RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 C7orf72A4D263 438 aa18.78■□□□□ 0.6
CHD3-204ENST00000439235 G3V2T6 193 aa18.78■□□□□ 0.6
CHD3-204ENST00000439235 PDGFAP04085 211 aa18.78■□□□□ 0.6
CHD3-204ENST00000439235 GDF1P27539 372 aa18.78■□□□□ 0.6
CHD3-204ENST00000439235 APOBEC1P41238 236 aaKnown RBP18.78■□□□□ 0.6
CHD3-204ENST00000439235 CD97P48960 835 aa18.78■□□□□ 0.6
CHD3-204ENST00000439235 MERTKQ12866 999 aa18.78■□□□□ 0.6
CHD3-204ENST00000439235 FOXD4Q12950 439 aaPredicted RBP18.78■□□□□ 0.6
CHD3-204ENST00000439235 PPP1R8Q12972 351 aaKnown RBP18.78■□□□□ 0.6
CHD3-204ENST00000439235 TOMM20Q15388 145 aa18.78■□□□□ 0.6
CHD3-204ENST00000439235 MICAQ29983 383 aa18.78■□□□□ 0.6
CHD3-204ENST00000439235 HYAL4Q2M3T9 481 aa18.78■□□□□ 0.6
CHD3-204ENST00000439235 GLYR1Q49A26 553 aaPredicted RBP18.78■□□□□ 0.6
CHD3-204ENST00000439235 PODNL1Q6PEZ8 512 aa18.78■□□□□ 0.6
CHD3-204ENST00000439235 ZNF730Q6ZMV8 503 aa18.78■□□□□ 0.6
CHD3-204ENST00000439235 Q6ZS92 163 aa18.78■□□□□ 0.6
CHD3-204ENST00000439235 RRM2BQ7LG56 351 aa18.78■□□□□ 0.6
CHD3-204ENST00000439235 NKAIN4Q8IVV8 208 aa18.78■□□□□ 0.6
CHD3-204ENST00000439235 C9orf43Q8TAL5 461 aaPredicted RBP18.78■□□□□ 0.6
CHD3-204ENST00000439235 SLC7A13Q8TCU3 470 aa18.78■□□□□ 0.6
CHD3-204ENST00000439235 PRSS27Q9BQR3 290 aa18.78■□□□□ 0.6
CHD3-204ENST00000439235 FUZQ9BT04 418 aa18.78■□□□□ 0.6
CHD3-204ENST00000439235 VCX3BQ9H321 246 aa18.78■□□□□ 0.6
CHD3-204ENST00000439235 ZNF703Q9H7S9 590 aaPredicted RBP18.78■□□□□ 0.6
CHD3-204ENST00000439235 KRCC1Q9NPI7 259 aaPredicted RBP18.78■□□□□ 0.6
CHD3-204ENST00000439235 TP53TG5Q9Y2B4 290 aa18.78■□□□□ 0.6
CHD3-204ENST00000439235 A0A087WUJ7 227 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 SH3PXD2BA1X283 911 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 ARRDC5A6NEK1 342 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 NTN1O95631 604 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 ZNF17P17021 662 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 CXCR1P25024 350 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 ADH6P28332 368 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 OGFRL1Q5TC84 451 aaPredicted RBP18.77■□□□□ 0.6
CHD3-204ENST00000439235 TTC33Q6PID6 262 aaPredicted RBP18.77■□□□□ 0.6
CHD3-204ENST00000439235 ASB18Q6ZVZ8 466 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.77■□□□□ 0.6
CHD3-204ENST00000439235 TMEM179BQ7Z7N9 219 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 SLC22A16Q86VW1 577 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 EPHX4Q8IUS5 362 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 OR10G2Q8NGC3 310 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 GIPC3Q8TF64 312 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 TMEM239Q8WW34 195 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 ZNF524Q96C55 264 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 CIB1Q99828 191 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 OSBPL10Q9BXB5 764 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 OR2B2Q9GZK3 357 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 UBQLN3Q9H347 655 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 C8orf4Q9NR00 106 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 SERINC1Q9NRX5 453 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 QPCTLQ9NXS2 382 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 PDP1Q9P0J1 537 aaPredicted RBP18.77■□□□□ 0.6
CHD3-204ENST00000439235 OSGIN1Q9UJX0 560 aa18.77■□□□□ 0.6
CHD3-204ENST00000439235 MRPS18CQ9Y3D5 142 aaKnown RBP18.77■□□□□ 0.6
CHD3-204ENST00000439235 FREM2Q5SZK8 3169 aa18.77■□□□□ 0.59
CHD3-204ENST00000439235 A0A087WUU8 490 aa18.76■□□□□ 0.59
CHD3-204ENST00000439235 GLSO94925 669 aaPredicted RBP18.76■□□□□ 0.59
CHD3-204ENST00000439235 RFPL3SP0C7P2 107 aa18.76■□□□□ 0.59
CHD3-204ENST00000439235 FUT4P22083 530 aa18.76■□□□□ 0.59
CHD3-204ENST00000439235 PEX2P28328 305 aa18.76■□□□□ 0.59
CHD3-204ENST00000439235 IFNGR2P38484 337 aa18.76■□□□□ 0.59
CHD3-204ENST00000439235 MAP2K6P52564 334 aa18.76■□□□□ 0.59
CHD3-204ENST00000439235 INAQ16352 499 aa18.76■□□□□ 0.59
CHD3-204ENST00000439235 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.76■□□□□ 0.59
CHD3-204ENST00000439235 LINC00303Q3SY05 128 aa18.76■□□□□ 0.59
CHD3-204ENST00000439235 WDR88Q6ZMY6 472 aa18.76■□□□□ 0.59
CHD3-204ENST00000439235 STK32CQ86UX6 486 aa18.76■□□□□ 0.59
CHD3-204ENST00000439235 RNF113BQ8IZP6 322 aaKnown RBP18.76■□□□□ 0.59
CHD3-204ENST00000439235 GTPBP8Q8N3Z3 284 aaPredicted RBP18.76■□□□□ 0.59
CHD3-204ENST00000439235 RBMXL3Q8N7X1 1067 aaKnown RBP18.76■□□□□ 0.59
CHD3-204ENST00000439235 OR4K5Q8NGD3 323 aa18.76■□□□□ 0.59
CHD3-204ENST00000439235 TMEM255BQ8WV15 326 aa18.76■□□□□ 0.59
CHD3-204ENST00000439235 PSD2Q9BQI7 771 aa18.76■□□□□ 0.59
CHD3-204ENST00000439235 PIGQQ9BRB3 760 aa18.76■□□□□ 0.59
CHD3-204ENST00000439235 ZNF426Q9BUY5 554 aa18.76■□□□□ 0.59
CHD3-204ENST00000439235 SLC19A3Q9BZV2 496 aa18.76■□□□□ 0.59
CHD3-204ENST00000439235 GABARAPL1Q9H0R8 117 aa18.76■□□□□ 0.59
CHD3-204ENST00000439235 VCXQ9H320 206 aa18.76■□□□□ 0.59
CHD3-204ENST00000439235 B3GNT3Q9Y2A9 372 aa18.76■□□□□ 0.59
CHD3-204ENST00000439235 MED31Q9Y3C7 131 aa18.76■□□□□ 0.59
CHD3-204ENST00000439235 SPIN1Q9Y657 262 aaPredicted RBP18.76■□□□□ 0.59
CHD3-204ENST00000439235 TMED7-TICAM2A0A0A6YYA0 188 aa18.75■□□□□ 0.59
CHD3-204ENST00000439235 FAM166BA8MTA8 275 aa18.75■□□□□ 0.59
CHD3-204ENST00000439235 K7EM74 188 aa18.75■□□□□ 0.59
CHD3-204ENST00000439235 OR10H3O60404 316 aa18.75■□□□□ 0.59
CHD3-204ENST00000439235 FAM87AP0C7U9 286 aa18.75■□□□□ 0.59
CHD3-204ENST00000439235 ELK4P28324 431 aa18.75■□□□□ 0.59
CHD3-204ENST00000439235 LAPTM4AQ15012 233 aa18.75■□□□□ 0.59
CHD3-204ENST00000439235 SEC23BQ15437 767 aa18.75■□□□□ 0.59
CHD3-204ENST00000439235 RAET1LQ5VY80 246 aa18.75■□□□□ 0.59
CHD3-204ENST00000439235 LPCAT4Q643R3 524 aa18.75■□□□□ 0.59
CHD3-204ENST00000439235 POMZP3Q6PJE2 187 aa18.75■□□□□ 0.59
CHD3-204ENST00000439235 LINC00114Q6XXX2 140 aa18.75■□□□□ 0.59
CHD3-204ENST00000439235 ZBTB49Q6ZSB9 765 aa18.75■□□□□ 0.59
CHD3-204ENST00000439235 MBOAT2Q6ZWT7 520 aa18.75■□□□□ 0.59
CHD3-204ENST00000439235 TMEM251Q8N6I4 163 aa18.75■□□□□ 0.59
CHD3-204ENST00000439235 FAM83FQ8NEG4 500 aaPredicted RBP18.75■□□□□ 0.59
CHD3-204ENST00000439235 OR14L1PQ8NHC6 308 aa18.75■□□□□ 0.59
CHD3-204ENST00000439235 PIGXQ8TBF5 258 aa18.75■□□□□ 0.59
CHD3-204ENST00000439235 POC1BQ8TC44 478 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms