RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 TRIB1Q96RU8 372 aa15.23■□□□□ 0.03
TARDBP-203ENST00000439080 ARHGDIGQ99819 225 aa15.23■□□□□ 0.03
TARDBP-203ENST00000439080 CTPS2Q9NRF8 586 aa15.23■□□□□ 0.03
TARDBP-203ENST00000439080 TESQ9UGI8 421 aaKnown RBP15.23■□□□□ 0.03
TARDBP-203ENST00000439080 GJE1A6NN92 205 aa15.22■□□□□ 0.03
TARDBP-203ENST00000439080 CXCR6O00574 342 aa15.22■□□□□ 0.03
TARDBP-203ENST00000439080 TNFSF11O14788 317 aa15.22■□□□□ 0.03
TARDBP-203ENST00000439080 GSTA4O15217 222 aa15.22■□□□□ 0.03
TARDBP-203ENST00000439080 LDLRP01130 860 aa15.22■□□□□ 0.03
TARDBP-203ENST00000439080 HOXD4P09016 255 aaPredicted RBP15.22■□□□□ 0.03
TARDBP-203ENST00000439080 GLI4P10075 376 aa15.22■□□□□ 0.03
TARDBP-203ENST00000439080 HTR2AP28223 471 aa15.22■□□□□ 0.03
TARDBP-203ENST00000439080 HTR3AP46098 478 aa15.22■□□□□ 0.03
TARDBP-203ENST00000439080 POLR2HP52434 150 aaKnown RBP15.22■□□□□ 0.03
TARDBP-203ENST00000439080 ZNF136P52737 540 aa15.22■□□□□ 0.03
TARDBP-203ENST00000439080 NUP107P57740 925 aa15.22■□□□□ 0.03
TARDBP-203ENST00000439080 SF3B4Q15427 424 aaKnown RBP eCLIP15.22■□□□□ 0.032e-7■□□□□ 10.4
TARDBP-203ENST00000439080 CTU2Q2VPK5 515 aaKnown RBP15.22■□□□□ 0.03
TARDBP-203ENST00000439080 SAMD4BQ5PRF9 694 aaKnown RBP15.22■□□□□ 0.03
TARDBP-203ENST00000439080 WBP2NLQ6ICG8 309 aa15.22■□□□□ 0.03
TARDBP-203ENST00000439080 RINLQ6ZS11 566 aa15.22■□□□□ 0.03
TARDBP-203ENST00000439080 ESPNLQ6ZVH7 1005 aa15.22■□□□□ 0.03
TARDBP-203ENST00000439080 MED12LQ86YW9 2145 aa15.22■□□□□ 0.03
TARDBP-203ENST00000439080 LACC1Q8IV20 430 aa15.22■□□□□ 0.03
TARDBP-203ENST00000439080 ATP6V1C2Q8NEY4 427 aa15.22■□□□□ 0.03
TARDBP-203ENST00000439080 TNIP2Q8NFZ5 429 aa15.22■□□□□ 0.03
TARDBP-203ENST00000439080 ADGRG7Q96K78 797 aa15.22■□□□□ 0.03
TARDBP-203ENST00000439080 WFDC6Q9BQY6 131 aa15.22■□□□□ 0.03
TARDBP-203ENST00000439080 TTYH2Q9BSA4 534 aa15.22■□□□□ 0.03
TARDBP-203ENST00000439080 CHRNA9Q9UGM1 479 aa15.22■□□□□ 0.03
TARDBP-203ENST00000439080 PCNX1Q96RV3 2341 aa15.21■□□□□ 0.03
TARDBP-203ENST00000439080 DOPEY1Q5JWR5 2465 aa15.21■□□□□ 0.03
TARDBP-203ENST00000439080 ZG16O60844 167 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 LGI1O95970 557 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 IFNA14P01570 189 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 FESP07332 822 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 C8BP07358 591 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 TACR3P29371 465 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 KDELR2P33947 212 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 APOBEC1P41238 236 aaKnown RBP15.21■□□□□ 0.02
TARDBP-203ENST00000439080 EIF1AXP47813 144 aaKnown RBP15.21■□□□□ 0.02
TARDBP-203ENST00000439080 RPS3AP61247 264 aaKnown RBP15.21■□□□□ 0.02
TARDBP-203ENST00000439080 NRF1Q16656 503 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 CYBRD1Q53TN4 286 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 NSUN5P2Q63ZY6 315 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 TMEM211Q6ICI0 200 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 PLXDC2Q6UX71 529 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 SEM1Q6ZVN7 128 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 ADGRE4PQ86SQ3 457 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 RANBP3LQ86VV4 465 aaPredicted RBP15.21■□□□□ 0.02
TARDBP-203ENST00000439080 FAM156AQ8NDB6 213 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 OR10D3Q8NH80 312 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 VANGL1Q8TAA9 524 aaPredicted RBP15.21■□□□□ 0.02
TARDBP-203ENST00000439080 SSC4DQ8WTU2 575 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 ZNF845Q96IR2 970 aaPredicted RBP15.21■□□□□ 0.02
TARDBP-203ENST00000439080 CDRT15Q96T59 188 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 EVA1AQ9H8M9 152 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 SERINC1Q9NRX5 453 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 CLCF1Q9UBD9 225 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 EGFL7Q9UHF1 273 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 OSGIN1Q9UJX0 560 aa15.21■□□□□ 0.02
TARDBP-203ENST00000439080 SPIN1Q9Y657 262 aaPredicted RBP15.21■□□□□ 0.02
TARDBP-203ENST00000439080 UTP20O75691 2785 aaKnown RBP15.21■□□□□ 0.02
TARDBP-203ENST00000439080 TMED7-TICAM2A0A0A6YYA0 188 aa15.2■□□□□ 0.02
TARDBP-203ENST00000439080 A0A0J9YW62 118 aa15.2■□□□□ 0.02
TARDBP-203ENST00000439080 CD8B2A6NJW9 211 aa15.2■□□□□ 0.02
TARDBP-203ENST00000439080 HSD17B1P14061 328 aa15.2■□□□□ 0.02
TARDBP-203ENST00000439080 NCK1P16333 377 aa15.2■□□□□ 0.02
TARDBP-203ENST00000439080 GGT1P19440 569 aa15.2■□□□□ 0.02
TARDBP-203ENST00000439080 TCN1P20061 433 aaPredicted RBP15.2■□□□□ 0.02
TARDBP-203ENST00000439080 HTR1EP28566 365 aa15.2■□□□□ 0.02
TARDBP-203ENST00000439080 SLC7A1P30825 629 aa15.2■□□□□ 0.02
TARDBP-203ENST00000439080 PMPCAQ10713 525 aa15.2■□□□□ 0.02
TARDBP-203ENST00000439080 SYT14P1Q58G82 188 aa15.2■□□□□ 0.02
TARDBP-203ENST00000439080 CHMP1BQ7LBR1 199 aa15.2■□□□□ 0.02
TARDBP-203ENST00000439080 OR52E4Q8NGH9 312 aa15.2■□□□□ 0.02
TARDBP-203ENST00000439080 OR2V1Q8NHB1 315 aa15.2■□□□□ 0.02
TARDBP-203ENST00000439080 SLC25A43Q8WUT9 341 aaPredicted RBP15.2■□□□□ 0.02
TARDBP-203ENST00000439080 PROX1Q92786 737 aa15.2■□□□□ 0.02
TARDBP-203ENST00000439080 FAM162AQ96A26 154 aa15.2■□□□□ 0.02
TARDBP-203ENST00000439080 C3orf49Q96BT1 292 aa15.2■□□□□ 0.02
TARDBP-203ENST00000439080 COQ10BQ9H8M1 238 aa15.2■□□□□ 0.02
TARDBP-203ENST00000439080 CALHM2Q9HA72 323 aa15.2■□□□□ 0.02
TARDBP-203ENST00000439080 BAG5Q9UL15 447 aa15.2■□□□□ 0.02
TARDBP-203ENST00000439080 TMED7Q9Y3B3 224 aa15.2■□□□□ 0.02
TARDBP-203ENST00000439080 MBD3L4A6NDZ8 208 aaPredicted RBP15.19■□□□□ 0.02
TARDBP-203ENST00000439080 MBD3L3A6NE82 208 aaPredicted RBP15.19■□□□□ 0.02
TARDBP-203ENST00000439080 MBD3L5A6NJ08 208 aaPredicted RBP15.19■□□□□ 0.02
TARDBP-203ENST00000439080 ADAMDEC1O15204 470 aa15.19■□□□□ 0.02
TARDBP-203ENST00000439080 CCNA2P20248 432 aa15.19■□□□□ 0.02
TARDBP-203ENST00000439080 PON3Q15166 354 aa15.19■□□□□ 0.02
TARDBP-203ENST00000439080 NPTX1Q15818 432 aa15.19■□□□□ 0.02
TARDBP-203ENST00000439080 TMEM176BQ3YBM2 270 aaPredicted RBP15.19■□□□□ 0.02
TARDBP-203ENST00000439080 HBMQ6B0K9 141 aa15.19■□□□□ 0.02
TARDBP-203ENST00000439080 PPP4R4Q6NUP7 873 aa15.19■□□□□ 0.02
TARDBP-203ENST00000439080 ADGRG3Q86Y34 549 aa15.19■□□□□ 0.02
TARDBP-203ENST00000439080 OR4D11Q8NGI4 311 aa15.19■□□□□ 0.02
TARDBP-203ENST00000439080 OR6T1Q8NGN1 323 aa15.19■□□□□ 0.02
TARDBP-203ENST00000439080 MBD3L2Q8NHZ7 208 aaPredicted RBP15.19■□□□□ 0.02
TARDBP-203ENST00000439080 RND1Q92730 232 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms