RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 MUS81Q96NY9 551 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 STACQ99469 402 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 BPESC1Q9GZL8 116 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 DUSP22Q9NRW4 184 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 ACSS1Q9NUB1 689 aaPredicted RBP12.96□□□□□ -0.33
HDAC8-213ENST00000436675 C1orf109Q9NX04 203 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 FIS1Q9Y3D6 152 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 DTNAQ9Y4J8 743 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.96□□□□□ -0.33
HDAC8-213ENST00000436675 EXOC1LA0A1B0GW35 172 aa12.95□□□□□ -0.34
HDAC8-213ENST00000436675 LOC390937A0A1W2PQ73 354 aa12.95□□□□□ -0.34
HDAC8-213ENST00000436675 ZNF716A6NP11 495 aa12.95□□□□□ -0.34
HDAC8-213ENST00000436675 ESPNB1AK53 854 aa12.95□□□□□ -0.34
HDAC8-213ENST00000436675 NPIPB8E9PQR5 432 aa12.95□□□□□ -0.34
HDAC8-213ENST00000436675 MRPL33O75394 65 aaKnown RBP12.95□□□□□ -0.34
HDAC8-213ENST00000436675 SLU7O95391 586 aaKnown RBP12.95□□□□□ -0.34
HDAC8-213ENST00000436675 IL2RGP31785 369 aa12.95□□□□□ -0.34
HDAC8-213ENST00000436675 SESN3P58005 492 aa12.95□□□□□ -0.34
HDAC8-213ENST00000436675 SNRPD2P62316 118 aaKnown RBP12.95□□□□□ -0.34
HDAC8-213ENST00000436675 CSNK2A1P68400 391 aaPredicted RBP12.95□□□□□ -0.34
HDAC8-213ENST00000436675 PDZK1Q5T2W1 519 aa12.95□□□□□ -0.34
HDAC8-213ENST00000436675 OR7E24Q6IFN5 339 aa12.95□□□□□ -0.34
HDAC8-213ENST00000436675 CASP12Q6UXS9 341 aa12.95□□□□□ -0.34
HDAC8-213ENST00000436675 OLIG3Q7RTU3 272 aa12.95□□□□□ -0.34
HDAC8-213ENST00000436675 MTDHQ86UE4 582 aaKnown RBP12.95□□□□□ -0.34
HDAC8-213ENST00000436675 IFT81Q8WYA0 676 aa12.95□□□□□ -0.34
HDAC8-213ENST00000436675 OCEL1Q9H607 264 aa12.95□□□□□ -0.34
HDAC8-213ENST00000436675 SERINC1Q9NRX5 453 aa12.95□□□□□ -0.34
HDAC8-213ENST00000436675 TMEFF2Q9UIK5 374 aaPredicted RBP12.95□□□□□ -0.34
HDAC8-213ENST00000436675 IGKV3D-15A0A087WSY6 115 aa12.94□□□□□ -0.34
HDAC8-213ENST00000436675 A0A087WUV0 522 aaPredicted RBP12.94□□□□□ -0.34
HDAC8-213ENST00000436675 NPIPB9F8W1W9 429 aa12.94□□□□□ -0.34
HDAC8-213ENST00000436675 KLF11O14901 512 aa12.94□□□□□ -0.34
HDAC8-213ENST00000436675 EIF4E2O60573 245 aaKnown RBP12.94□□□□□ -0.34
HDAC8-213ENST00000436675 TBX19O60806 448 aa12.94□□□□□ -0.34
HDAC8-213ENST00000436675 CDH2P19022 906 aaPredicted RBP12.94□□□□□ -0.34
HDAC8-213ENST00000436675 GCAP28676 217 aa12.94□□□□□ -0.34
HDAC8-213ENST00000436675 CASQ1P31415 396 aa12.94□□□□□ -0.34
HDAC8-213ENST00000436675 RPL38P63173 70 aaKnown RBP12.94□□□□□ -0.34
HDAC8-213ENST00000436675 PDE7AQ13946 482 aa12.94□□□□□ -0.34
HDAC8-213ENST00000436675 SPDYE7PQ495Y7 208 aa12.94□□□□□ -0.34
HDAC8-213ENST00000436675 SYT14P1Q58G82 188 aa12.94□□□□□ -0.34
HDAC8-213ENST00000436675 CFAP157Q5JU67 520 aa12.94□□□□□ -0.34
HDAC8-213ENST00000436675 TIFABQ6ZNK6 161 aa12.94□□□□□ -0.34
HDAC8-213ENST00000436675 SPATA19Q7Z5L4 167 aa12.94□□□□□ -0.34
HDAC8-213ENST00000436675 RELL1Q8IUW5 271 aa12.94□□□□□ -0.34
HDAC8-213ENST00000436675 OR2T11Q8NH01 316 aa12.94□□□□□ -0.34
HDAC8-213ENST00000436675 ZHX1-C8orf76Q96EF9 292 aa12.94□□□□□ -0.34
HDAC8-213ENST00000436675 ZNF764Q96H86 408 aaPredicted RBP12.94□□□□□ -0.34
HDAC8-213ENST00000436675 CCT7Q99832 543 aa12.94□□□□□ -0.34
HDAC8-213ENST00000436675 ACTRT3Q9BYD9 372 aa12.94□□□□□ -0.34
HDAC8-213ENST00000436675 SLC17A5Q9NRA2 495 aa12.94□□□□□ -0.34
HDAC8-213ENST00000436675 UPB1Q9UBR1 384 aa12.94□□□□□ -0.34
HDAC8-213ENST00000436675 MALT1Q9UDY8 824 aa12.94□□□□□ -0.34
HDAC8-213ENST00000436675 FAF1Q9UNN5 650 aaPredicted RBP12.94□□□□□ -0.34
HDAC8-213ENST00000436675 SERINC4A6NH21 518 aa12.93□□□□□ -0.34
HDAC8-213ENST00000436675 SLC28A1O00337 649 aa12.93□□□□□ -0.34
HDAC8-213ENST00000436675 SKAP2O75563 359 aaPredicted RBP12.93□□□□□ -0.34
HDAC8-213ENST00000436675 RGS9O75916 674 aaPredicted RBP12.93□□□□□ -0.34
HDAC8-213ENST00000436675 VENTXO95231 258 aa12.93□□□□□ -0.34
HDAC8-213ENST00000436675 UROSP10746 265 aa12.93□□□□□ -0.34
HDAC8-213ENST00000436675 MYL2P10916 166 aa12.93□□□□□ -0.34
HDAC8-213ENST00000436675 CCNA2P20248 432 aa12.93□□□□□ -0.34
HDAC8-213ENST00000436675 CCT3P49368 545 aaKnown RBP12.93□□□□□ -0.34
HDAC8-213ENST00000436675 OR2B6P58173 313 aa12.93□□□□□ -0.34
HDAC8-213ENST00000436675 GPR68Q15743 365 aa12.93□□□□□ -0.34
HDAC8-213ENST00000436675 FAM174BQ3ZCQ3 159 aa12.93□□□□□ -0.34
HDAC8-213ENST00000436675 GALNTL6Q49A17 601 aa12.93□□□□□ -0.34
HDAC8-213ENST00000436675 RFTN2Q52LD8 501 aaPredicted RBP12.93□□□□□ -0.34
HDAC8-213ENST00000436675 VHLLQ6RSH7 139 aa12.93□□□□□ -0.34
HDAC8-213ENST00000436675 RINLQ6ZS11 566 aa12.93□□□□□ -0.34
HDAC8-213ENST00000436675 FRMD7Q6ZUT3 714 aa12.93□□□□□ -0.34
HDAC8-213ENST00000436675 OR7A2PQ8NGA2 310 aa12.93□□□□□ -0.34
HDAC8-213ENST00000436675 OR5D16Q8NGK9 328 aa12.93□□□□□ -0.34
HDAC8-213ENST00000436675 ARL5BQ96KC2 179 aa12.93□□□□□ -0.34
HDAC8-213ENST00000436675 BHLHE41Q9C0J9 482 aaPredicted RBP12.93□□□□□ -0.34
HDAC8-213ENST00000436675 OR11A1Q9GZK7 315 aa12.93□□□□□ -0.34
HDAC8-213ENST00000436675 SLC7A10Q9NS82 523 aa12.93□□□□□ -0.34
HDAC8-213ENST00000436675 EMCNQ9ULC0 261 aa12.93□□□□□ -0.34
HDAC8-213ENST00000436675 AMDHD2Q9Y303 409 aa12.93□□□□□ -0.34
HDAC8-213ENST00000436675 CENPVL1A0A0U1RR11 272 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 G3V2L1 256 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 ETV2O00321 342 aaPredicted RBP12.92□□□□□ -0.34
HDAC8-213ENST00000436675 GPR171O14626 319 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 LINC00032P0C843 101 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 UBTFL6P0CB48 400 aaPredicted RBP12.92□□□□□ -0.34
HDAC8-213ENST00000436675 LAMP1P11279 417 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 PRPH2P23942 346 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 APEX1P27695 318 aaKnown RBP12.92□□□□□ -0.34
HDAC8-213ENST00000436675 SERPINF1P36955 418 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 RPS26P62854 115 aaKnown RBP12.92□□□□□ -0.34
HDAC8-213ENST00000436675 SKP2Q13309 424 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 PDK3Q15120 406 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 HIKESHIQ53FT3 197 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 LIPMQ5VYY2 423 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 BHLHB9Q6PI77 547 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 ZYG11AQ6WRX3 759 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 OR5AK3PQ8NH89 298 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 PIGXQ8TBF5 258 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 ST8SIA1Q92185 356 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms