RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 ZNF550Q7Z398 422 aa17.12■□□□□ 0.33
CLK1-205ENST00000434813 PARGQ86W56 976 aa17.12■□□□□ 0.33
CLK1-205ENST00000434813 NR2C2APQ86WQ0 139 aa17.12■□□□□ 0.33
CLK1-205ENST00000434813 NLGN4YQ8NFZ3 816 aaPredicted RBP17.12■□□□□ 0.33
CLK1-205ENST00000434813 ST6GAL2Q96JF0 529 aa17.12■□□□□ 0.33
CLK1-205ENST00000434813 LRFN5Q96NI6 719 aa17.12■□□□□ 0.33
CLK1-205ENST00000434813 B3GAT2Q9NPZ5 323 aa17.12■□□□□ 0.33
CLK1-205ENST00000434813 MALT1Q9UDY8 824 aa17.12■□□□□ 0.33
CLK1-205ENST00000434813 MRPS33Q9Y291 106 aaKnown RBP17.12■□□□□ 0.33
CLK1-205ENST00000434813 DTX4Q9Y2E6 619 aa17.12■□□□□ 0.33
CLK1-205ENST00000434813 TRIOO75962 3097 aa17.12■□□□□ 0.33
CLK1-205ENST00000434813 HMX3A6NHT5 357 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 HRO43593 1189 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 CLUP10909 449 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 KIR2DL3P43628 341 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 MAP2K3P46734 347 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 BLKP51451 505 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 ZNF85Q03923 595 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 STX4Q12846 297 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 MADCAM1Q13477 382 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 FAM53BQ14153 422 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 NPSR1Q6W5P4 371 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 C19orf18Q8NEA5 215 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 ENKURQ8TC29 256 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 ADAMTS18Q8TE60 1221 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 SMPDL3BQ92485 455 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 TNFRSF13CQ96RJ3 184 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 LRRC61Q9BV99 259 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 RNF121Q9H920 327 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 SERTAD3Q9UJW9 196 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 TMEM131Q92545 1883 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 SYNDIG1LA6NDD5 238 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 B4DGG1 531 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 E9PI62 339 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 HRKO00198 91 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 FOXS1O43638 330 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 SRPX2O60687 465 aaPredicted RBP17.11■□□□□ 0.33
CLK1-205ENST00000434813 PRAMEF2O60811 474 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 CTNSO60931 367 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 MYL9P24844 172 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 CRYZQ08257 329 aaKnown RBP17.11■□□□□ 0.33
CLK1-205ENST00000434813 DBPQ10586 325 aaPredicted RBP17.11■□□□□ 0.33
CLK1-205ENST00000434813 GAS6Q14393 721 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 ULK3Q6PHR2 472 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 ARL9Q6T311 187 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 CMIPQ8IY22 773 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 ZNF595Q8IYB9 648 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 CYB561A3Q8NBI2 242 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 KCTD12Q96CX2 325 aaKnown RBP17.11■□□□□ 0.33
CLK1-205ENST00000434813 RBM18Q96H35 190 aaKnown RBP17.11■□□□□ 0.33
CLK1-205ENST00000434813 C4orf36Q96KX1 117 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 UBL7Q96S82 380 aaPredicted RBP17.11■□□□□ 0.33
CLK1-205ENST00000434813 TMEM43Q9BTV4 400 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 LMAN1LQ9HAT1 526 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 Q9N2J8 555 aa17.11■□□□□ 0.33
CLK1-205ENST00000434813 SLC9B1P1A6NJY1 282 aa17.1■□□□□ 0.33
CLK1-205ENST00000434813 PSMD4P55036 377 aaKnown RBP17.1■□□□□ 0.33
CLK1-205ENST00000434813 TMEM53Q6P2H8 277 aa17.1■□□□□ 0.33
CLK1-205ENST00000434813 KIRREL2Q6UWL6 708 aa17.1■□□□□ 0.33
CLK1-205ENST00000434813 VASH1Q7L8A9 365 aaPredicted RBP17.1■□□□□ 0.33
CLK1-205ENST00000434813 TSTD1Q8NFU3 115 aa17.1■□□□□ 0.33
CLK1-205ENST00000434813 MAFAQ8NHW3 353 aaPredicted RBP17.1■□□□□ 0.33
CLK1-205ENST00000434813 PEX11GQ96HA9 241 aa17.1■□□□□ 0.33
CLK1-205ENST00000434813 FRMD6Q96NE9 622 aa17.1■□□□□ 0.33
CLK1-205ENST00000434813 G6PC3Q9BUM1 346 aa17.1■□□□□ 0.33
CLK1-205ENST00000434813 OR2B2Q9GZK3 357 aa17.1■□□□□ 0.33
CLK1-205ENST00000434813 ERVMER34-1Q9H9K5 563 aa17.1■□□□□ 0.33
CLK1-205ENST00000434813 RBFOX1Q9NWB1 397 aaKnown RBP17.1■□□□□ 0.33
CLK1-205ENST00000434813 FBXL4Q9UKA2 621 aa17.1■□□□□ 0.33
CLK1-205ENST00000434813 MRPS17Q9Y2R5 130 aaKnown RBP17.1■□□□□ 0.33
CLK1-205ENST00000434813 CLDN16Q9Y5I7 305 aa17.1■□□□□ 0.33
CLK1-205ENST00000434813 CACNA1IQ9P0X4 2223 aa17.1■□□□□ 0.33
CLK1-205ENST00000434813 CHURC1-FNTBB4DL54 471 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 SC5DO75845 299 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 GSTT2P0CG29 244 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 GSTT2BP0CG30 244 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 HOXD12P35452 270 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 NUDT1P36639 197 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 GPR3P46089 330 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 ATP12AP54707 1039 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 E2F1Q01094 437 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 SRSF5Q13243 272 aaKnown RBP17.09■□□□□ 0.33
CLK1-205ENST00000434813 QPRTQ15274 297 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 FAAH2Q6GMR7 532 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 RCBTB1Q8NDN9 531 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 SPACA7Q96KW9 195 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 KCNJ15Q99712 375 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 GPR174Q9BXC1 333 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 PRTFDC1Q9NRG1 225 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 CHRNA9Q9UGM1 479 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 RBMX2Q9Y388 322 aaKnown RBP17.09■□□□□ 0.33
CLK1-205ENST00000434813 N6AMT1Q9Y5N5 214 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 A0A0B4J293 547 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 A0A1W2PPC4 97 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 EFCAB7A8K855 629 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 CSF2P04141 144 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 GPR143P51810 404 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 IFITM2Q01629 132 aa17.09■□□□□ 0.33
CLK1-205ENST00000434813 CSTF1Q05048 431 aaKnown RBP17.09■□□□□ 0.33
CLK1-205ENST00000434813 TBRG1Q3YBR2 411 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms