RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 SPICQ8N5J4 248 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 FAM98AQ8NCA5 519 aaKnown RBP10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 BRIX1Q8TDN6 353 aaKnown RBP10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 C2orf15Q8WU43 125 aaKnown RBP10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 ZMYND19Q96E35 227 aaPredicted RBP10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 PEX11GQ96HA9 241 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 TMEM185BQ9H7F4 350 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 POT1Q9NUX5 634 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 OPN4Q9UHM6 478 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 GNG8Q9UK08 70 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 ABHD14A-ACY1A0A1B0GW23 586 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 UNC119BA6NIH7 251 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 F8W036 122 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 J3QRE1 110 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 CACNB4O00305 520 aaPredicted RBP10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 SBK2P0C263 348 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 GKN3PP0CG01 181 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 EDNRAP25101 427 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 ART1P52961 327 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 TAS2R38P59533 333 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 TAF1CQ15572 869 aaPredicted RBP10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 NDUFAF6Q330K2 333 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 C4orf46Q504U0 113 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 UBE2NLQ5JXB2 153 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 HENMT1Q5T8I9 393 aaKnown RBP10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 MBOAT2Q6ZWT7 520 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 PXKQ7Z7A4 578 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 SYNPRQ8TBG9 265 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 CYB5D2Q8WUJ1 264 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 SNX33Q8WV41 574 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 ZNF689Q96CS4 500 aaPredicted RBP10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 AIF1LQ9BQI0 150 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 DNTTIP1Q9H147 329 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 FKRPQ9H9S5 495 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 EXOSC3Q9NQT5 275 aaKnown RBP10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 C20orf141Q9NUB4 165 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 EMC3Q9P0I2 261 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 EDARQ9UNE0 448 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 ENTPD4Q9Y227 616 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 TRAV27A0A087WT01 109 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 OR2M5A3KFT3 312 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 PRAMEF2O60811 474 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 CDC123O75794 336 aaPredicted RBP10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 HPP00738 406 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 TNFRSF17Q02223 184 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 ZNF85Q03923 595 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 FGL1Q08830 312 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 CRMP1Q14194 572 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 TRAM1Q15629 374 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 CBLN2Q8IUK8 224 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 OR8S1Q8NH09 359 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 OVCA2Q8WZ82 227 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 S100A16Q96FQ6 103 aaKnown RBP10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 OR7D2Q96RA2 312 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 C1QTNF2Q9BXJ5 285 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 MS4A8Q9BY19 250 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 ESRP2Q9H6T0 727 aaKnown RBP10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 SYNPO2LQ9H987 977 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 NOX4Q9NPH5 578 aa10.7□□□□□ -0.7
HMGCS1-202ENST00000433297 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 OR5K4A6NMS3 321 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 K7ESM1 405 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 NDUFS4O43181 175 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 POP7O75817 140 aaKnown RBP10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 PVALBP20472 110 aaPredicted RBP10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 MC3RP41968 323 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 HOXA1P49639 335 aaPredicted RBP10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 ANXA11P50995 505 aaKnown RBP10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 FOXK2Q01167 660 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 B3GNTL1Q67FW5 361 aaPredicted RBP10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 FIBINQ8TAL6 211 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 WDR34Q96EX3 536 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 GIMAP5Q96F15 307 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 MNTQ99583 582 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 SLC38A1Q9H2H9 487 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 CACYBPQ9HB71 228 aaKnown RBP10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 PURGQ9UJV8 347 aaKnown RBP10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 SLC45A1Q9Y2W3 748 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 PPIL1Q9Y3C6 166 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 SLC22A31A6NKX4 558 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 NEDD8-MDP1E9PL57 170 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 GABARAPH6UMI1 98 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 GSTZ1O43708 216 aaPredicted RBP10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 VSIG10L2P0DP72 767 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 TAS2R43P59537 309 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 RPS15P62841 145 aaKnown RBP10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 DUSP2Q05923 314 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 ELAVL2Q12926 359 aaKnown RBP10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 DECR1Q16698 335 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 THSD4Q6ZMP0 1018 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 OR13C2Q8NGS9 318 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 OR4C6Q8NH72 309 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 SLC25A28Q96A46 364 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 SCLYQ96I15 445 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 ZNF334Q9HCZ1 680 aaPredicted RBP10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 SIDT1Q9NXL6 827 aaKnown RBP10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 KIAA1671Q9BY89 1806 aa10.69□□□□□ -0.7
HMGCS1-202ENST00000433297 A0A1B0GW55 424 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 OR2W5A6NFC9 320 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 GREM1O60565 184 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms