RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 KBTBD8Q8NFY9 601 aa17.92■□□□□ 0.46
VRK2-205ENST00000432057 CEP76Q8TAP6 659 aa17.92■□□□□ 0.46
VRK2-205ENST00000432057 BORCS5Q969J3 196 aa17.92■□□□□ 0.46
VRK2-205ENST00000432057 NACC2Q96BF6 587 aa17.92■□□□□ 0.46
VRK2-205ENST00000432057 SGTBQ96EQ0 304 aa17.92■□□□□ 0.46
VRK2-205ENST00000432057 KLHDC3Q9BQ90 382 aa17.92■□□□□ 0.46
VRK2-205ENST00000432057 HCAR1Q9BXC0 346 aa17.92■□□□□ 0.46
VRK2-205ENST00000432057 RTN4RQ9BZR6 473 aa17.92■□□□□ 0.46
VRK2-205ENST00000432057 CMC2Q9NRP2 79 aa17.92■□□□□ 0.46
VRK2-205ENST00000432057 H2AFY2Q9P0M6 372 aaPredicted RBP17.92■□□□□ 0.46
VRK2-205ENST00000432057 ICAM5Q9UMF0 924 aa17.92■□□□□ 0.46
VRK2-205ENST00000432057 ZC3H12DA2A288 527 aaKnown RBP17.91■□□□□ 0.46
VRK2-205ENST00000432057 IDSB3KWA1 339 aa17.91■□□□□ 0.46
VRK2-205ENST00000432057 J3QRK9 145 aa17.91■□□□□ 0.46
VRK2-205ENST00000432057 WWP2O00308 870 aa17.91■□□□□ 0.46
VRK2-205ENST00000432057 TO15178 435 aa17.91■□□□□ 0.46
VRK2-205ENST00000432057 TSPAN2O60636 221 aa17.91■□□□□ 0.46
VRK2-205ENST00000432057 GPX5O75715 221 aa17.91■□□□□ 0.46
VRK2-205ENST00000432057 WNT4P56705 351 aa17.91■□□□□ 0.46
VRK2-205ENST00000432057 TIMM50Q3ZCQ8 353 aa17.91■□□□□ 0.46
VRK2-205ENST00000432057 WBP2NLQ6ICG8 309 aa17.91■□□□□ 0.46
VRK2-205ENST00000432057 ANKRD37Q7Z713 158 aa17.91■□□□□ 0.46
VRK2-205ENST00000432057 GID4Q8IVV7 300 aa17.91■□□□□ 0.46
VRK2-205ENST00000432057 ZNF441Q8N8Z8 693 aa17.91■□□□□ 0.46
VRK2-205ENST00000432057 OMA1Q96E52 524 aa17.91■□□□□ 0.46
VRK2-205ENST00000432057 VMP1Q96GC9 406 aa17.91■□□□□ 0.46
VRK2-205ENST00000432057 SH3YL1Q96HL8 342 aaPredicted RBP17.91■□□□□ 0.46
VRK2-205ENST00000432057 GFM1Q96RP9 751 aaKnown RBP17.91■□□□□ 0.46
VRK2-205ENST00000432057 FN3KQ9H479 309 aa17.91■□□□□ 0.46
VRK2-205ENST00000432057 SMOC1Q9H4F8 434 aa17.91■□□□□ 0.46
VRK2-205ENST00000432057 EXOSC3Q9NQT5 275 aaKnown RBP17.91■□□□□ 0.46
VRK2-205ENST00000432057 OCIAD1Q9NX40 245 aa17.91■□□□□ 0.46
VRK2-205ENST00000432057 CHCHD3Q9NX63 227 aaKnown RBP17.91■□□□□ 0.46
VRK2-205ENST00000432057 CORINQ9Y5Q5 1042 aa17.91■□□□□ 0.46
VRK2-205ENST00000432057 TMEM129A0AVI4 362 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 FAM86C2PA6NEL3 165 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 OR6C76A6NM76 312 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 C17orf51A8MQB3 221 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 HEXBP07686 556 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 ENDOUP21128 410 aaKnown RBP17.9■□□□□ 0.46
VRK2-205ENST00000432057 TUBA1BP68363 451 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 LIPKQ5VXJ0 399 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 B3GLCTQ6Y288 498 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 TUBA1AQ71U36 451 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 SIRT6Q8N6T7 355 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 LRRC17Q8N6Y2 441 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 DTWD2Q8NBA8 298 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 NDUFB11Q9NX14 153 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 EXOGQ9Y2C4 368 aaKnown RBP17.9■□□□□ 0.46
VRK2-205ENST00000432057 CPAMD8Q8IZJ3 1885 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 IGKV1D-42A0A075B6H8 117 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 ELOA3DA6NLF2 546 aaPredicted RBP17.9■□□□□ 0.46
VRK2-205ENST00000432057 MST1P26927 711 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 ABCD3P28288 659 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 SLC6A6P31641 620 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 SLC1A3P43003 542 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 SLC9A3P48764 834 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 DCDP81605 110 aaKnown RBP17.9■□□□□ 0.46
VRK2-205ENST00000432057 ZNF117Q03924 483 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.9■□□□□ 0.46
VRK2-205ENST00000432057 ELOA3BQ3SY89 546 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 ZNF385CQ66K41 422 aaPredicted RBP17.9■□□□□ 0.46
VRK2-205ENST00000432057 LHFPL3Q86UP9 236 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 PPP1R3BQ86XI6 285 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 ELOA3Q8NG57 546 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 ZNF524Q96C55 264 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 CTRCQ99895 268 aa17.9■□□□□ 0.46
VRK2-205ENST00000432057 GMFGO60234 142 aa17.89■□□□□ 0.45
VRK2-205ENST00000432057 IDUAP35475 653 aa17.89■□□□□ 0.45
VRK2-205ENST00000432057 SLC23A3Q6PIS1 610 aa17.89■□□□□ 0.45
VRK2-205ENST00000432057 RTL4Q6ZR62 310 aa17.89■□□□□ 0.45
VRK2-205ENST00000432057 ATG4DQ86TL0 474 aaPredicted RBP17.89■□□□□ 0.45
VRK2-205ENST00000432057 IGFN1Q86VF2 1251 aa17.89■□□□□ 0.45
VRK2-205ENST00000432057 OR51G2Q8NGK0 314 aa17.89■□□□□ 0.45
VRK2-205ENST00000432057 OR6Q1Q8NGQ2 317 aa17.89■□□□□ 0.45
VRK2-205ENST00000432057 MCFD2Q8NI22 146 aa17.89■□□□□ 0.45
VRK2-205ENST00000432057 GATAD2BQ8WXI9 593 aa17.89■□□□□ 0.45
VRK2-205ENST00000432057 HSPBAP1Q96EW2 488 aa17.89■□□□□ 0.45
VRK2-205ENST00000432057 EXOSC4Q9NPD3 245 aaKnown RBP17.89■□□□□ 0.45
VRK2-205ENST00000432057 AKIP1Q9NQ31 210 aa17.89■□□□□ 0.45
VRK2-205ENST00000432057 FBXO4Q9UKT5 387 aa17.89■□□□□ 0.45
VRK2-205ENST00000432057 SPIN1Q9Y657 262 aaPredicted RBP17.89■□□□□ 0.45
VRK2-205ENST00000432057 TMEM221A6NGB7 291 aa17.88■□□□□ 0.45
VRK2-205ENST00000432057 METTL15A6NJ78 407 aa17.88■□□□□ 0.45
VRK2-205ENST00000432057 RIIAD1A6NNX1 92 aa17.88■□□□□ 0.45
VRK2-205ENST00000432057 D6RAR5 112 aa17.88■□□□□ 0.45
VRK2-205ENST00000432057 PRR23D1E9PI22 279 aaPredicted RBP17.88■□□□□ 0.45
VRK2-205ENST00000432057 M0R296 226 aa17.88■□□□□ 0.45
VRK2-205ENST00000432057 GDF9O60383 454 aa17.88■□□□□ 0.45
VRK2-205ENST00000432057 ALOX12BO75342 701 aa17.88■□□□□ 0.45
VRK2-205ENST00000432057 IGHA1P01876 353 aa17.88■□□□□ 0.45
VRK2-205ENST00000432057 PRR23D2P0DMB1 279 aaPredicted RBP17.88■□□□□ 0.45
VRK2-205ENST00000432057 LCN1P31025 176 aa17.88■□□□□ 0.45
VRK2-205ENST00000432057 CRMP1Q14194 572 aa17.88■□□□□ 0.45
VRK2-205ENST00000432057 GXYLT1Q4G148 440 aa17.88■□□□□ 0.45
VRK2-205ENST00000432057 LCN10Q6JVE6 187 aa17.88■□□□□ 0.45
VRK2-205ENST00000432057 MEPCEQ7L2J0 689 aaKnown RBP17.88■□□□□ 0.45
VRK2-205ENST00000432057 MARCH3Q86UD3 253 aa17.88■□□□□ 0.45
VRK2-205ENST00000432057 CROCCP3Q8IVE0 287 aa17.88■□□□□ 0.45
VRK2-205ENST00000432057 PHC2Q8IXK0 858 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms