RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 LOC100506127A0A0U1RQW1 187 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 ZC3H12DA2A288 527 aaKnown RBP15.26■□□□□ 0.03
USHBP1-203ENST00000431146 ZNF264O43296 627 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 AIREO43918 545 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 TSPAN2O60636 221 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 RAB36O95755 333 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 SOX3P41225 446 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 RBM34P42696 430 aaKnown RBP15.26■□□□□ 0.03
USHBP1-203ENST00000431146 DUSP3P51452 185 aaPredicted RBP15.26■□□□□ 0.03
USHBP1-203ENST00000431146 GXYLT1Q4G148 440 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 PLBD1Q6P4A8 553 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 APCDD1LQ8NCL9 501 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 ZBTB20Q9HC78 741 aaPredicted RBP15.26■□□□□ 0.03
USHBP1-203ENST00000431146 RALGAPA1Q6GYQ0 2036 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 A0A087WUJ7 227 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 MEN1O00255 615 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 KHNYNO15037 678 aaKnown RBP15.26■□□□□ 0.03
USHBP1-203ENST00000431146 SLC22A1O15245 554 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 PTP4A3O75365 173 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 RCBTB2O95199 551 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 HBQ1P09105 142 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 MST1P26927 711 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 SLC9A3P48764 834 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 EMP2P54851 167 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 RNF4P78317 190 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 ZNF117Q03924 483 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 FHL1Q13642 323 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 AADACL4Q5VUY2 407 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 ZNF441Q8N8Z8 693 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 OR4F15Q8NGB8 312 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 OR5M3Q8NGP4 307 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 OPALINQ96PE5 141 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 TAPBPLQ9BX59 468 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 HCAR1Q9BXC0 346 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 OCEL1Q9H607 264 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 MCCC2Q9HCC0 563 aa15.26■□□□□ 0.03
USHBP1-203ENST00000431146 DIMT1Q9UNQ2 313 aaKnown RBP15.26■□□□□ 0.03
USHBP1-203ENST00000431146 M0R3G1 203 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 PFDN1O60925 122 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 PPP1R3DO95685 299 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 HMGN1P05114 100 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 ADH7P40394 386 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 CLK1P49759 484 aaKnown RBP15.25■□□□□ 0.03
USHBP1-203ENST00000431146 ENTPD1P49961 510 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 RPS3AP61247 264 aaKnown RBP15.25■□□□□ 0.03
USHBP1-203ENST00000431146 CCDC157Q569K6 752 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 CXXC5Q7LFL8 322 aaKnown RBP15.25■□□□□ 0.03
USHBP1-203ENST00000431146 IGFN1Q86VF2 1251 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 NANOGP1Q8N7R0 232 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 DNAJA4Q8WW22 397 aaPredicted RBP15.25■□□□□ 0.03
USHBP1-203ENST00000431146 METTL21AQ8WXB1 218 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 DEPDC7Q96QD5 511 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 SPSB2Q99619 263 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 MND1Q9BWT6 205 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 TEX51A0A1B0GUA7 166 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 SAGE2PA6NJ88 616 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 HCRTR2O43614 444 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 SCO2O43819 266 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 HCN1O60741 890 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 ZNF354AO60765 605 aaPredicted RBP15.25■□□□□ 0.03
USHBP1-203ENST00000431146 FOXK2Q01167 660 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 SPHARQ15513 63 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 SSX1Q16384 188 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 KLHL22Q53GT1 634 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 OR2G6Q5TZ20 316 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 WBP2NLQ6ICG8 309 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 PAPD4Q6PIY7 484 aaKnown RBP15.25■□□□□ 0.03
USHBP1-203ENST00000431146 SLCO6A1Q86UG4 719 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 ZNF440Q8IYI8 595 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 LNX2Q8N448 690 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 NFAM1Q8NET5 270 aaPredicted RBP15.25■□□□□ 0.03
USHBP1-203ENST00000431146 CHCHD6Q9BRQ6 235 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 CRB3Q9BUF7 120 aa15.25■□□□□ 0.03
USHBP1-203ENST00000431146 IGKV1D-42A0A075B6H8 117 aa15.24■□□□□ 0.03
USHBP1-203ENST00000431146 VSTM2BA6NLU5 285 aa15.24■□□□□ 0.03
USHBP1-203ENST00000431146 OR6C76A6NM76 312 aa15.24■□□□□ 0.03
USHBP1-203ENST00000431146 SNTNA6NMZ2 147 aa15.24■□□□□ 0.03
USHBP1-203ENST00000431146 MYL12BO14950 172 aa15.24■□□□□ 0.03
USHBP1-203ENST00000431146 TO15178 435 aa15.24■□□□□ 0.03
USHBP1-203ENST00000431146 LDOC1O95751 146 aaPredicted RBP15.24■□□□□ 0.03
USHBP1-203ENST00000431146 FGF5P12034 268 aa15.24■□□□□ 0.03
USHBP1-203ENST00000431146 CD79BP40259 229 aa15.24■□□□□ 0.03
USHBP1-203ENST00000431146 RAB40BQ12829 278 aa15.24■□□□□ 0.03
USHBP1-203ENST00000431146 TOMM34Q15785 309 aaPredicted RBP15.24■□□□□ 0.03
USHBP1-203ENST00000431146 BMPERQ8N8U9 685 aa15.24■□□□□ 0.03
USHBP1-203ENST00000431146 CYB561A3Q8NBI2 242 aa15.24■□□□□ 0.03
USHBP1-203ENST00000431146 AGBL5Q8NDL9 886 aa15.24■□□□□ 0.03
USHBP1-203ENST00000431146 C7orf57Q8NEG2 295 aa15.24■□□□□ 0.03
USHBP1-203ENST00000431146 ZNF563Q8TA94 476 aa15.24■□□□□ 0.03
USHBP1-203ENST00000431146 RHBDD1Q8TEB9 315 aa15.24■□□□□ 0.03
USHBP1-203ENST00000431146 DNAJA3Q96EY1 480 aa15.24■□□□□ 0.03
USHBP1-203ENST00000431146 BCL7BQ9BQE9 202 aa15.24■□□□□ 0.03
USHBP1-203ENST00000431146 CENPOQ9BU64 300 aa15.24■□□□□ 0.03
USHBP1-203ENST00000431146 TBL1XR1Q9BZK7 514 aa15.24■□□□□ 0.03
USHBP1-203ENST00000431146 MED17Q9NVC6 651 aa15.24■□□□□ 0.03
USHBP1-203ENST00000431146 LNP1A1A4G5 178 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 ELOA3DA6NLF2 546 aaPredicted RBP15.23■□□□□ 0.03
USHBP1-203ENST00000431146 WWP2O00308 870 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 NDUFB5O43674 189 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 CLPXO76031 633 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms