RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 C3orf49Q96BT1 292 aa12.81□□□□□ -0.36
HOXC4-202ENST00000430889 SENP5Q96HI0 755 aaPredicted RBP12.81□□□□□ -0.36
HOXC4-202ENST00000430889 CEP19Q96LK0 163 aa12.81□□□□□ -0.36
HOXC4-202ENST00000430889 ALG8Q9BVK2 526 aa12.81□□□□□ -0.36
HOXC4-202ENST00000430889 MIR1-1HGQ9H1L0 117 aa12.81□□□□□ -0.36
HOXC4-202ENST00000430889 MUTYHQ9UIF7 546 aa12.81□□□□□ -0.36
HOXC4-202ENST00000430889 TBC1D24Q9ULP9 559 aa12.81□□□□□ -0.36
HOXC4-202ENST00000430889 GSTK1Q9Y2Q3 226 aa12.81□□□□□ -0.36
HOXC4-202ENST00000430889 IGKV1D-42A0A075B6H8 117 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 RIIAD1A6NNX1 92 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 RHPN2P1A8MT19 583 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 C17orf105B2RV13 164 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 IL33O95760 270 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 DDAH2O95865 285 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 CSTAP01040 98 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 IGF2P01344 180 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 HLA-DPB1P04440 258 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 SBK2P0C263 348 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 HK1P19367 917 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 CELP19835 753 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 CSF2RBP32927 897 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 PPICP45877 212 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 CSNK1EP49674 416 aaKnown RBP12.8□□□□□ -0.36
HOXC4-202ENST00000430889 GPR143P51810 404 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 RPS4XP62701 263 aaKnown RBP12.8□□□□□ -0.36
HOXC4-202ENST00000430889 RUNX1T1Q06455 604 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 CRYZQ08257 329 aaKnown RBP12.8□□□□□ -0.36
HOXC4-202ENST00000430889 CD300CQ08708 224 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 GDPD3Q7L5L3 318 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 KLBQ86Z14 1044 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 ZNF440Q8IYI8 595 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 D2HGDHQ8N465 521 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 CCNL2Q96S94 520 aaPredicted RBP12.8□□□□□ -0.36
HOXC4-202ENST00000430889 DDOQ99489 341 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 SOSTQ9BQB4 213 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 TPK1Q9H3S4 243 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 ABCB9Q9NP78 766 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 BABAM2Q9NXR7 383 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 FBXL4Q9UKA2 621 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 ZMIZ1Q9ULJ6 1067 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 MAU2Q9Y6X3 613 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 K7ESF4 209 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 GTPBP1O00178 669 aaKnown RBP12.8□□□□□ -0.36
HOXC4-202ENST00000430889 SEC14L5O43304 696 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 OIP5O43482 229 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 RNF13O43567 381 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 NUDT21O43809 227 aaKnown RBP12.8□□□□□ -0.36
HOXC4-202ENST00000430889 IFNA16P05015 189 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 ATXN8OSP0DMR3 200 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 CLUP10909 449 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 ZNF3P17036 446 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 CD53P19397 219 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 PAICSP22234 425 aaKnown RBP12.8□□□□□ -0.36
HOXC4-202ENST00000430889 OR1D5P58170 312 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 ZNF85Q03923 595 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 DBPQ10586 325 aaPredicted RBP12.8□□□□□ -0.36
HOXC4-202ENST00000430889 SKP2Q13309 424 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 GGTLC2Q14390 218 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 CCDC85BQ15834 202 aaPredicted RBP12.8□□□□□ -0.36
HOXC4-202ENST00000430889 ZMAT1Q5H9K5 638 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 MARCH9Q86YJ5 346 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 CADM2Q8N3J6 435 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 OR4C6Q8NH72 309 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 SETD6Q8TBK2 473 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 ZNF721Q8TF20 911 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 CHAC2Q8WUX2 184 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.8□□□□□ -0.36
HOXC4-202ENST00000430889 ADIPOR1Q96A54 375 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 SGTBQ96EQ0 304 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 AHCYL2Q96HN2 611 aaKnown RBP12.8□□□□□ -0.36
HOXC4-202ENST00000430889 SLC41A2Q96JW4 573 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 SLC46A1Q96NT5 459 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 SLC19A3Q9BZV2 496 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 MKKSQ9NPJ1 570 aaPredicted RBP12.8□□□□□ -0.36
HOXC4-202ENST00000430889 EXOSC3Q9NQT5 275 aaKnown RBP12.8□□□□□ -0.36
HOXC4-202ENST00000430889 ZNF229Q9UJW7 825 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 OR10H1Q9Y4A9 318 aa12.8□□□□□ -0.36
HOXC4-202ENST00000430889 ARID1BQ8NFD5 2236 aaPredicted RBP12.79□□□□□ -0.36
HOXC4-202ENST00000430889 ASXL3Q9C0F0 2248 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 TNRC6BQ9UPQ9 1833 aaKnown RBP12.79□□□□□ -0.36
HOXC4-202ENST00000430889 FRG2CA6NGY1 282 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 POLR1CO15160 346 aaPredicted RBP12.79□□□□□ -0.36
HOXC4-202ENST00000430889 RGS5O15539 181 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 REM1O75628 298 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 OR2B3O76000 313 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 NDUFB2O95178 105 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 ATP6V1E1P36543 226 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 HSD11B2P80365 405 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 INSL4Q14641 139 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 CD226Q15762 336 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 ISXQ2M1V0 245 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.79□□□□□ -0.36
HOXC4-202ENST00000430889 FCRLBQ6BAA4 426 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 PRSS42Q7Z5A4 293 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 ATG4DQ86TL0 474 aaPredicted RBP12.79□□□□□ -0.36
HOXC4-202ENST00000430889 SLITRK4Q8IW52 837 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 SLC35F3Q8IY50 421 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 SLC25A45Q8N413 288 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 OR5M3Q8NGP4 307 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 OR1L3Q8NH93 324 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms