RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 CSNK2A1P68400 391 aaPredicted RBP15.68■□□□□ 0.1
NUP50-208ENST00000430547 SYT14P1Q58G82 188 aa15.68■□□□□ 0.1
NUP50-208ENST00000430547 TTMPQ5BVD1 217 aa15.68■□□□□ 0.1
NUP50-208ENST00000430547 AP1ARQ63HQ0 302 aa15.68■□□□□ 0.1
NUP50-208ENST00000430547 GRINAQ7Z429 371 aa15.68■□□□□ 0.1
NUP50-208ENST00000430547 TUSC5Q8IXB3 177 aa15.68■□□□□ 0.1
NUP50-208ENST00000430547 PEX5LQ8IYB4 626 aa15.68■□□□□ 0.1
NUP50-208ENST00000430547 PMM1Q92871 262 aa15.68■□□□□ 0.1
NUP50-208ENST00000430547 ALPK1Q96QP1 1244 aa15.68■□□□□ 0.1
NUP50-208ENST00000430547 MTHFD2LQ9H903 347 aaPredicted RBP15.68■□□□□ 0.1
NUP50-208ENST00000430547 TPT1P8Q9HAU6 139 aa15.68■□□□□ 0.1
NUP50-208ENST00000430547 CALML5Q9NZT1 146 aa15.68■□□□□ 0.1
NUP50-208ENST00000430547 FREM1Q5H8C1 2179 aa15.68■□□□□ 0.1
NUP50-208ENST00000430547 CLDN24A6NM45 220 aa15.67■□□□□ 0.1
NUP50-208ENST00000430547 HMGB1P1B2RPK0 211 aaPredicted RBP15.67■□□□□ 0.1
NUP50-208ENST00000430547 SULT2B1O00204 365 aa15.67■□□□□ 0.1
NUP50-208ENST00000430547 DBIP07108 87 aaKnown RBP15.67■□□□□ 0.1
NUP50-208ENST00000430547 YES1P07947 543 aa15.67■□□□□ 0.1
NUP50-208ENST00000430547 NID1P14543 1247 aa15.67■□□□□ 0.1
NUP50-208ENST00000430547 DIO1P49895 249 aa15.67■□□□□ 0.1
NUP50-208ENST00000430547 CRISP3P54108 245 aa15.67■□□□□ 0.1
NUP50-208ENST00000430547 DSTNP60981 165 aa15.67■□□□□ 0.1
NUP50-208ENST00000430547 STAC2Q6ZMT1 411 aa15.67■□□□□ 0.1
NUP50-208ENST00000430547 CNOT9Q92600 299 aaKnown RBP15.67■□□□□ 0.1
NUP50-208ENST00000430547 VPS33AQ96AX1 596 aa15.67■□□□□ 0.1
NUP50-208ENST00000430547 ZHX1-C8orf76Q96EF9 292 aa15.67■□□□□ 0.1
NUP50-208ENST00000430547 SLCO1B3Q9NPD5 702 aa15.67■□□□□ 0.1
NUP50-208ENST00000430547 CTPS2Q9NRF8 586 aa15.67■□□□□ 0.1
NUP50-208ENST00000430547 SLC6A13Q9NSD5 602 aa15.67■□□□□ 0.1
NUP50-208ENST00000430547 INTS9Q9NV88 658 aaKnown RBP15.67■□□□□ 0.1
NUP50-208ENST00000430547 THUMPD1Q9NXG2 353 aaKnown RBP15.67■□□□□ 0.1
NUP50-208ENST00000430547 CHRNA9Q9UGM1 479 aa15.67■□□□□ 0.1
NUP50-208ENST00000430547 ITPR3Q14573 2671 aa15.67■□□□□ 0.1
NUP50-208ENST00000430547 DEFB108AA8MXU0 73 aa15.66■□□□□ 0.1
NUP50-208ENST00000430547 BCAS1O75363 584 aaPredicted RBP15.66■□□□□ 0.1
NUP50-208ENST00000430547 ATE1O95260 518 aa15.66■□□□□ 0.1
NUP50-208ENST00000430547 BCHEP06276 602 aa15.66■□□□□ 0.1
NUP50-208ENST00000430547 ETFAP13804 333 aa15.66■□□□□ 0.1
NUP50-208ENST00000430547 FKBP2P26885 142 aaKnown RBP15.66■□□□□ 0.1
NUP50-208ENST00000430547 HTR3AP46098 478 aa15.66■□□□□ 0.1
NUP50-208ENST00000430547 IDH2P48735 452 aaKnown RBP15.66■□□□□ 0.1
NUP50-208ENST00000430547 PPP2R2AP63151 447 aa15.66■□□□□ 0.1
NUP50-208ENST00000430547 RASGEF1BQ0VAM2 473 aa15.66■□□□□ 0.1
NUP50-208ENST00000430547 TMPPEQ6ZT21 453 aa15.66■□□□□ 0.1
NUP50-208ENST00000430547 MBD6Q96DN6 1003 aa15.66■□□□□ 0.1
NUP50-208ENST00000430547 CCDC106Q9BWC9 280 aa15.66■□□□□ 0.1
NUP50-208ENST00000430547 ACTR6Q9GZN1 396 aa15.66■□□□□ 0.1
NUP50-208ENST00000430547 CXXC4Q9H2H0 198 aa15.66■□□□□ 0.1
NUP50-208ENST00000430547 RAD21L1Q9H4I0 556 aa15.66■□□□□ 0.1
NUP50-208ENST00000430547 GPR52Q9Y2T5 361 aa15.66■□□□□ 0.1
NUP50-208ENST00000430547 PRRC2AP48634 2157 aaKnown RBP15.66■□□□□ 0.1
NUP50-208ENST00000430547 SMAD9O15198 467 aaKnown RBP15.65■□□□□ 0.1
NUP50-208ENST00000430547 FESP07332 822 aa15.65■□□□□ 0.1
NUP50-208ENST00000430547 PSMB1P20618 241 aaKnown RBP15.65■□□□□ 0.1
NUP50-208ENST00000430547 RPS4Y1P22090 263 aaKnown RBP15.65■□□□□ 0.1
NUP50-208ENST00000430547 AQP5P55064 265 aa15.65■□□□□ 0.1
NUP50-208ENST00000430547 DEFB113Q30KQ7 82 aa15.65■□□□□ 0.1
NUP50-208ENST00000430547 GTDC1Q4AE62 458 aa15.65■□□□□ 0.1
NUP50-208ENST00000430547 LIN52Q52LA3 116 aa15.65■□□□□ 0.1
NUP50-208ENST00000430547 MRPL2Q5T653 305 aaKnown RBP15.65■□□□□ 0.1
NUP50-208ENST00000430547 TFAP2EQ6VUC0 442 aa15.65■□□□□ 0.1
NUP50-208ENST00000430547 NUFIP2Q7Z417 695 aaKnown RBP15.65■□□□□ 0.1
NUP50-208ENST00000430547 ZNF440Q8IYI8 595 aa15.65■□□□□ 0.1
NUP50-208ENST00000430547 STEAP2Q8NFT2 490 aa15.65■□□□□ 0.1
NUP50-208ENST00000430547 AURKBQ96GD4 344 aaPredicted RBP15.65■□□□□ 0.1
NUP50-208ENST00000430547 PSD2Q9BQI7 771 aa15.65■□□□□ 0.1
NUP50-208ENST00000430547 EBF4Q9BQW3 602 aa15.65■□□□□ 0.1
NUP50-208ENST00000430547 OR10A4Q9H209 315 aa15.65■□□□□ 0.1
NUP50-208ENST00000430547 VIPAS39Q9H9C1 493 aa15.65■□□□□ 0.1
NUP50-208ENST00000430547 BCO1Q9HAY6 547 aa15.65■□□□□ 0.1
NUP50-208ENST00000430547 EMC3Q9P0I2 261 aa15.65■□□□□ 0.1
NUP50-208ENST00000430547 MAP1AP78559 2803 aaPredicted RBP15.65■□□□□ 0.1
NUP50-208ENST00000430547 A0A1W2PPR1 153 aa15.64■□□□□ 0.09
NUP50-208ENST00000430547 CFAP73A6NFT4 308 aa15.64■□□□□ 0.09
NUP50-208ENST00000430547 NR5A2O00482 541 aa15.64■□□□□ 0.09
NUP50-208ENST00000430547 SIAH2O43255 324 aa15.64■□□□□ 0.09
NUP50-208ENST00000430547 CYTIPO60759 359 aa15.64■□□□□ 0.09
NUP50-208ENST00000430547 CCNA2P20248 432 aa15.64■□□□□ 0.09
NUP50-208ENST00000430547 IL32P24001 234 aa15.64■□□□□ 0.09
NUP50-208ENST00000430547 CLK1P49759 484 aaKnown RBP15.64■□□□□ 0.09
NUP50-208ENST00000430547 IDH3AP50213 366 aa15.64■□□□□ 0.09
NUP50-208ENST00000430547 POLR2HP52434 150 aaKnown RBP15.64■□□□□ 0.09
NUP50-208ENST00000430547 BEX5Q5H9J7 111 aa15.64■□□□□ 0.09
NUP50-208ENST00000430547 SLC2A7Q6PXP3 512 aa15.64■□□□□ 0.09
NUP50-208ENST00000430547 CXorf67Q86X51 503 aaPredicted RBP15.64■□□□□ 0.09
NUP50-208ENST00000430547 WFDC8Q8IUA0 241 aa15.64■□□□□ 0.09
NUP50-208ENST00000430547 OR52P1PQ8NH57 321 aa15.64■□□□□ 0.09
NUP50-208ENST00000430547 GTF2H4Q92759 462 aa15.64■□□□□ 0.09
NUP50-208ENST00000430547 DDIT4LQ96D03 193 aa15.64■□□□□ 0.09
NUP50-208ENST00000430547 CCDC28BQ9BUN5 200 aa15.64■□□□□ 0.09
NUP50-208ENST00000430547 HDHD5Q9BXW7 423 aa15.64■□□□□ 0.09
NUP50-208ENST00000430547 ARMC7Q9H6L4 198 aa15.64■□□□□ 0.09
NUP50-208ENST00000430547 UBTD1Q9HAC8 227 aa15.64■□□□□ 0.09
NUP50-208ENST00000430547 CCDC167Q9P0B6 97 aa15.64■□□□□ 0.09
NUP50-208ENST00000430547 HDGFL3Q9Y3E1 203 aa15.64■□□□□ 0.09
NUP50-208ENST00000430547 TMED7-TICAM2A0A0A6YYA0 188 aa15.63■□□□□ 0.09
NUP50-208ENST00000430547 AP3D1O14617 1153 aa15.63■□□□□ 0.09
NUP50-208ENST00000430547 PMS2P2O95744 297 aa15.63■□□□□ 0.09
NUP50-208ENST00000430547 MRPL19P49406 292 aaKnown RBP15.63■□□□□ 0.09
NUP50-208ENST00000430547 MVDP53602 400 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms