RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 ZW10O43264 779 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 AQP9O43315 295 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 GRID2O43424 1007 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 KLHL41O60662 606 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 SAP30O75446 220 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 GMNNO75496 209 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 TXNDC12O95881 172 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 CLPTM1O96005 669 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 GPIP06744 558 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 KRT16P08779 473 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 OR4Q2P0C623 313 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 PRKAR1AP10644 381 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 THRBP10828 461 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 SLC2A2P11168 524 aaPredicted RBP3.56□□□□□ -1.84
HMGB3-203ENST00000430118 KRT13P13646 458 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 NCF1P14598 390 aaPredicted RBP3.56□□□□□ -1.84
HMGB3-203ENST00000430118 GABRG2P18507 467 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 NMT1P30419 496 aaKnown RBP3.56□□□□□ -1.84
HMGB3-203ENST00000430118 CEACAM8P31997 349 aaPredicted RBP3.56□□□□□ -1.84
HMGB3-203ENST00000430118 EVI2BP34910 448 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 SOX6P35712 828 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 OPRD1P41143 372 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 ETV1P50549 477 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 NUP107P57740 925 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 GNG2P59768 71 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 OSTNP61366 133 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 POLR2GP62487 172 aaKnown RBP eCLIP3.56□□□□□ -1.84
HMGB3-203ENST00000430118 HERV-K104P63124 156 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 KCNJ2P63252 427 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 MYBPC1Q00872 1141 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 PMP22Q01453 160 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 MYL5Q02045 173 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 RAD51Q06609 339 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 CNTN1Q12860 1018 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 P2RY6Q15077 328 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 TGFBIQ15582 683 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 STK11Q15831 433 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 EXT1Q16394 746 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 ZNF74Q16587 644 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 RGS21Q2M5E4 152 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 Q3ZCU0 254 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 RESP18Q5W5W9 173 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 AWAT2Q6E213 333 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 KDELC1Q6UW63 502 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 ISLR2Q6UXK2 745 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 FRA10AC1Q70Z53 315 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 YRDCQ86U90 279 aaKnown RBP3.56□□□□□ -1.84
HMGB3-203ENST00000430118 SLC22A16Q86VW1 577 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 ZNF677Q86XU0 584 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 ZNF573Q86YE8 665 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 ERI1Q8IV48 349 aaKnown RBP3.56□□□□□ -1.84
HMGB3-203ENST00000430118 MISPQ8IVT2 679 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 CDH26Q8IXH8 852 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 SLC35F6Q8N357 371 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 RIBC1Q8N443 379 aaPredicted RBP3.56□□□□□ -1.84
HMGB3-203ENST00000430118 NATD1Q8N6N6 113 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 LRRC17Q8N6Y2 441 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 LMNTD1Q8N9Z9 388 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 TTLQ8NG68 377 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 OR4D10Q8NGI6 311 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 SLC22A8Q8TCC7 542 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 DDI1Q8WTU0 396 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 HPSE2Q8WWQ2 592 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 THRSPQ92748 146 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 BORCS5Q969J3 196 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 MOCOSQ96EN8 888 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 LYZL4Q96KX0 146 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 ART5Q96L15 291 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 C10orf90Q96M02 699 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 OPALINQ96PE5 141 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 ZNF184Q99676 751 aaPredicted RBP3.56□□□□□ -1.84
HMGB3-203ENST00000430118 NKX3-1Q99801 234 aaPredicted RBP3.56□□□□□ -1.84
HMGB3-203ENST00000430118 GAL3ST1Q99999 423 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 TPPP3Q9BW30 176 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 GPR174Q9BXC1 333 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 TRIM15Q9C019 465 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 NCOR1P1Q9H4R4 102 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 NEK6Q9HC98 313 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 S100A14Q9HCY8 104 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 SDHAF3Q9NRP4 125 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 CENPMQ9NSP4 180 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 STMN3Q9NZ72 180 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 IL37Q9NZH6 218 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 DEC1Q9P2X7 70 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 RNF14Q9UBS8 474 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 COPS7AQ9UBW8 275 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 IL20RAQ9UHF4 553 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 BCAP29Q9UHQ4 241 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 GNPTGQ9UJJ9 305 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 NUP50Q9UKX7 468 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.56□□□□□ -1.84
HMGB3-203ENST00000430118 FAF1Q9UNN5 650 aaPredicted RBP3.56□□□□□ -1.84
HMGB3-203ENST00000430118 URB1O60287 2271 aaKnown RBP3.56□□□□□ -1.84
HMGB3-203ENST00000430118 SDK1Q7Z5N4 2213 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 TCHHQ07283 1943 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 PLXNB3Q9ULL4 1909 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 PIEZO2Q9H5I5 2752 aa3.56□□□□□ -1.84
HMGB3-203ENST00000430118 USP9XQ93008 2570 aaPredicted RBP3.56□□□□□ -1.84
HMGB3-203ENST00000430118 BSNQ9UPA5 3926 aa3.55□□□□□ -1.84
HMGB3-203ENST00000430118 TRAV6A0A075B6T7 132 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms