RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 SLC1A3P43003 542 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 KCNJ5P48544 419 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 POLR2HP52434 150 aaKnown RBP13.12□□□□□ -0.31
SGCE-204ENST00000428696 CLDN18P56856 261 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 CARD18P57730 90 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 ACSF3Q4G176 576 aaPredicted RBP13.12□□□□□ -0.31
SGCE-204ENST00000428696 GLYATQ6IB77 296 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 WBP2NLQ6ICG8 309 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 MTFR2Q6P444 385 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 FKBP9P1Q75LS8 142 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 CCDC80Q76M96 950 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 RANBP3LQ86VV4 465 aaPredicted RBP13.12□□□□□ -0.31
SGCE-204ENST00000428696 GPR32P1Q8NGA4 272 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 RASSF5Q8WWW0 418 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 RND1Q92730 232 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 OR5B2Q96R09 309 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 TTYH2Q9BSA4 534 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 TMEM27Q9HBJ8 222 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 ADPRHL2Q9NX46 363 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 BAG5Q9UL15 447 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 TMED7Q9Y3B3 224 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 HELZ2Q9BYK8 2649 aaKnown RBP13.11□□□□□ -0.31
SGCE-204ENST00000428696 FASNP49327 2511 aaKnown RBP13.11□□□□□ -0.31
SGCE-204ENST00000428696 GTF3C1Q12789 2109 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 A0A1W2PNR3 127 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 KDM4EB2RXH2 506 aaPredicted RBP13.11□□□□□ -0.31
SGCE-204ENST00000428696 GYG2O15488 501 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 CXCL13O43927 109 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 SYNGR4O95473 234 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 LGI1O95970 557 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 SERPINA1P01009 418 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 FESP07332 822 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 HOXD4P09016 255 aaPredicted RBP13.11□□□□□ -0.31
SGCE-204ENST00000428696 GLI4P10075 376 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 PSMA4P25789 261 aaKnown RBP13.11□□□□□ -0.31
SGCE-204ENST00000428696 SHC1P29353 583 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 PTGER4P35408 488 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 HTR3AP46098 478 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 SMSP52788 366 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 NUP107P57740 925 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 SELENBP1Q13228 472 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 PDSS1Q5T2R2 415 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 RTL6Q6ICC9 239 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 RBM45Q8IUH3 476 aaKnown RBP13.11□□□□□ -0.31
SGCE-204ENST00000428696 CCDC71Q8IV32 467 aaPredicted RBP13.11□□□□□ -0.31
SGCE-204ENST00000428696 OR10D3Q8NH80 312 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 OR2V1Q8NHB1 315 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 LZICQ8WZA0 190 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 OSTF1Q92882 214 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 CCDC120Q96HB5 630 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 ZNF845Q96IR2 970 aaPredicted RBP13.11□□□□□ -0.31
SGCE-204ENST00000428696 KLHL15Q96M94 604 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 MCHR1Q99705 422 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 WFDC6Q9BQY6 131 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 ZNF559Q9BR84 538 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 TIGARQ9NQ88 270 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 COQ3Q9NZJ6 369 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 ABCD2Q9UBJ2 740 aa13.11□□□□□ -0.31
SGCE-204ENST00000428696 SPIN1Q9Y657 262 aaPredicted RBP13.11□□□□□ -0.31
SGCE-204ENST00000428696 POLEQ07864 2286 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 A0A0J9YW62 118 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 SLC22A20A6NK97 555 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 CPSF4LA6NMK7 179 aaKnown RBP13.1□□□□□ -0.31
SGCE-204ENST00000428696 EPPINO95925 133 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 CD247P20963 164 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 ELK4P28324 431 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 OR1E2P47887 323 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 AGFG1P52594 562 aaKnown RBP13.1□□□□□ -0.31
SGCE-204ENST00000428696 BNIP2Q12982 314 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 SLC25A53Q5H9E4 307 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 C3orf33Q6P1S2 294 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 ESPNLQ6ZVH7 1005 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 MRGPRGQ86SM5 289 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 GGNQ86UU5 652 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 CARM1Q86X55 608 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 ADGRG3Q86Y34 549 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 OR6T1Q8NGN1 323 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 ZPLD1Q8TCW7 415 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 SDCCAG3Q96C92 435 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 THTPAQ9BU02 230 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 TRIM2Q9C040 744 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 OR11A1Q9GZK7 315 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 PCDHAC1Q9H158 963 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 CHRNA9Q9UGM1 479 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 OSGIN1Q9UJX0 560 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 SLC9A8Q9Y2E8 581 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 FAM215AQ9Y5M1 114 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 V9GYQ6 96 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 FLNCQ14315 2725 aa13.1□□□□□ -0.31
SGCE-204ENST00000428696 UBR5O95071 2799 aaPredicted RBP13.09□□□□□ -0.31
SGCE-204ENST00000428696 TENM4Q6N022 2769 aa13.09□□□□□ -0.31
SGCE-204ENST00000428696 ELOA3DA6NLF2 546 aaPredicted RBP13.09□□□□□ -0.31
SGCE-204ENST00000428696 PDE5AO76074 875 aa13.09□□□□□ -0.31
SGCE-204ENST00000428696 IL2RAP01589 272 aa13.09□□□□□ -0.31
SGCE-204ENST00000428696 C8BP07358 591 aa13.09□□□□□ -0.31
SGCE-204ENST00000428696 PTNP21246 168 aa13.09□□□□□ -0.31
SGCE-204ENST00000428696 HTR1EP28566 365 aa13.09□□□□□ -0.31
SGCE-204ENST00000428696 CPOXP36551 454 aa13.09□□□□□ -0.31
SGCE-204ENST00000428696 CRYBA2P53672 197 aa13.09□□□□□ -0.31
SGCE-204ENST00000428696 OR2B6P58173 313 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms