RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 VNN3Q9NY84 501 aa7.18□□□□□ -1.26
HMGA1P4-201ENST00000428643 C6orf203Q9P0P8 240 aaPredicted RBP7.18□□□□□ -1.26
HMGA1P4-201ENST00000428643 ACAD8Q9UKU7 415 aa7.18□□□□□ -1.26
HMGA1P4-201ENST00000428643 TMCC3Q9ULS5 477 aa7.18□□□□□ -1.26
HMGA1P4-201ENST00000428643 LHX6Q9UPM6 363 aa7.18□□□□□ -1.26
HMGA1P4-201ENST00000428643 PCDHGB6Q9Y5F9 930 aa7.18□□□□□ -1.26
HMGA1P4-201ENST00000428643 LYVE1Q9Y5Y7 322 aa7.18□□□□□ -1.26
HMGA1P4-201ENST00000428643 LAMA5O15230 3695 aa7.18□□□□□ -1.26
HMGA1P4-201ENST00000428643 PTPRQQ9UMZ3 2332 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 ATRXP46100 2492 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 TMED7-TICAM2A0A0A6YYA0 188 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 TRBV4-1A0A0J9YWV2 114 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 A0A1W2PRQ8 180 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 GLSO94925 669 aaPredicted RBP7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 CCNB2O95067 398 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 NTN1O95631 604 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 CELA3AP09093 270 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 PEPDP12955 493 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 ZNF17P17021 662 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 ZNF23P17027 643 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 FPR1P21462 350 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 FUT4P22083 530 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 GCKP35557 465 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 MAGEA5P43359 124 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 ARHGDIAP52565 204 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 FOXK1P85037 733 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 SLC34A1Q06495 639 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 RIPK1Q13546 671 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 DGCR6Q14129 220 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 LAPTM4AQ15012 233 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 INAQ16352 499 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 WIPI1Q5MNZ9 446 aaPredicted RBP7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 FBXW10Q5XX13 1052 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 HMBOX1Q6NT76 420 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 WDR88Q6ZMY6 472 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 RRM2BQ7LG56 351 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 ATG4DQ86TL0 474 aaPredicted RBP7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 LSRQ86X29 649 aaPredicted RBP7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 P3H2Q8IVL5 708 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 LILRA2Q8N149 483 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 GTPBP8Q8N3Z3 284 aaPredicted RBP7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 FAM83FQ8NEG4 500 aaPredicted RBP7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 TMEM255BQ8WV15 326 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 ACOT11Q8WXI4 607 aaPredicted RBP7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 SMPDL3BQ92485 455 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 SLC38A4Q969I6 547 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 PNPLA2Q96AD5 504 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 ZNF524Q96C55 264 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 MPP4Q96JB8 637 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 DHRS1Q96LJ7 313 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 ALPK1Q96QP1 1244 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 EPYCQ99645 322 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 OR2B2Q9GZK3 357 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 TSPAN10Q9H1Z9 355 aaPredicted RBP7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 SLC6A15Q9H2J7 730 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 UBQLN3Q9H347 655 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 ANKRD19PQ9H560 264 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 EXO5Q9H790 373 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 MAN2C1Q9NTJ4 1040 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 KIF17Q9P2E2 1029 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 STX18Q9P2W9 335 aaKnown RBP7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 NKX1-2Q9UD57 310 aaPredicted RBP7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 CHRNA9Q9UGM1 479 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 OSGIN1Q9UJX0 560 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 OAZ3Q9UMX2 235 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 TMED7Q9Y3B3 224 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 SPIN1Q9Y657 262 aaPredicted RBP7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 BAHCC1Q9P281 2608 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 CACNA1GO43497 2377 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 PKD1L2Q7Z442 2459 aa7.17□□□□□ -1.26
HMGA1P4-201ENST00000428643 OR2M5A3KFT3 312 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 C7orf72A4D263 438 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 G3V2T6 193 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 H3BML4 177 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 ERVH48-1M5A8F1 160 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 SUSD5O60279 629 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 PIP5K1CO60331 668 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 OR10H3O60404 316 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 LYPD3O95274 346 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 WISP1O95388 367 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 AHSA1O95433 338 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 THY1P04216 161 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 HPNP05981 417 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 TFPIP10646 304 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 SFTPCP11686 197 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 POU3F2P20265 443 aaPredicted RBP7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 IL11P20809 199 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 ELK4P28324 431 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 PEX2P28328 305 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 DNAJA1P31689 397 aaKnown RBP7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 SFTPDP35247 375 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 RBM34P42696 430 aaKnown RBP7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 ALDH6A1Q02252 535 aaKnown RBP7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 SELENBP1Q13228 472 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 GK3PQ14409 553 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 SEC23BQ15437 767 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 HYAL4Q2M3T9 481 aa7.16□□□□□ -1.26
HMGA1P4-201ENST00000428643 PLEKHN1Q494U1 663 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms