RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 GCNT6Q5T4J0 391 aa13.28□□□□□ -0.28
RTN4-210ENST00000427710 C3orf33Q6P1S2 294 aa13.28□□□□□ -0.28
RTN4-210ENST00000427710 DLEU7Q6UYE1 221 aa13.28□□□□□ -0.28
RTN4-210ENST00000427710 FAM214BQ7L5A3 538 aa13.28□□□□□ -0.28
RTN4-210ENST00000427710 ADGRG3Q86Y34 549 aa13.28□□□□□ -0.28
RTN4-210ENST00000427710 KIF18BQ86Y91 864 aa13.28□□□□□ -0.28
RTN4-210ENST00000427710 OIT3Q8WWZ8 545 aa13.28□□□□□ -0.28
RTN4-210ENST00000427710 CPPED1Q9BRF8 314 aaPredicted RBP13.28□□□□□ -0.28
RTN4-210ENST00000427710 CCDC106Q9BWC9 280 aa13.28□□□□□ -0.28
RTN4-210ENST00000427710 RSPO3Q9BXY4 272 aaPredicted RBP13.28□□□□□ -0.28
RTN4-210ENST00000427710 OR11A1Q9GZK7 315 aa13.28□□□□□ -0.28
RTN4-210ENST00000427710 RAD21L1Q9H4I0 556 aa13.28□□□□□ -0.28
RTN4-210ENST00000427710 A4GALTQ9NPC4 353 aa13.28□□□□□ -0.28
RTN4-210ENST00000427710 PAQR5Q9NXK6 330 aaPredicted RBP13.28□□□□□ -0.28
RTN4-210ENST00000427710 CALML5Q9NZT1 146 aa13.28□□□□□ -0.28
RTN4-210ENST00000427710 LEF1Q9UJU2 399 aaPredicted RBP13.28□□□□□ -0.28
RTN4-210ENST00000427710 TRIM33Q9UPN9 1127 aa13.28□□□□□ -0.28
RTN4-210ENST00000427710 A0A0G2JPF8 293 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 TMEM72A0PK05 275 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 TMEM247A6NEH6 219 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 GJE1A6NN92 205 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 HNRNPCL2B2RXH8 293 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 HNRNPCL3B7ZW38 293 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 HNRNPCL1O60812 293 aaKnown RBP13.27□□□□□ -0.29
RTN4-210ENST00000427710 SS18L1O75177 396 aaPredicted RBP13.27□□□□□ -0.29
RTN4-210ENST00000427710 HNRNPCL4P0DMR1 293 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 TROVE2P10155 538 aaKnown RBP eCLIP13.27□□□□□ -0.29
RTN4-210ENST00000427710 ARAFP10398 606 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 PRG2P13727 222 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 POU2F1P14859 743 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 KCNJ5P48544 419 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 EEF1A1P68104 462 aaKnown RBP13.27□□□□□ -0.29
RTN4-210ENST00000427710 HOXC5Q00444 222 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 FADDQ13158 208 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 GNA13Q14344 377 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 SYT14P1Q58G82 188 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 RUNDC3AQ59EK9 446 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 EEF1A1P5Q5VTE0 462 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 ANKRD34AQ69YU3 496 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 FCRLAQ7L513 359 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 ZNF550Q7Z398 422 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 NUFIP2Q7Z417 695 aaKnown RBP13.27□□□□□ -0.29
RTN4-210ENST00000427710 GRINAQ7Z429 371 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 DHDDSQ86SQ9 333 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 TUSC5Q8IXB3 177 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 CMIPQ8IY22 773 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 FAM222BQ8WU58 562 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 CPNE4Q96A23 557 aaPredicted RBP13.27□□□□□ -0.29
RTN4-210ENST00000427710 ZNF775Q96BV0 537 aaPredicted RBP13.27□□□□□ -0.29
RTN4-210ENST00000427710 REXO5Q96IC2 774 aaKnown RBP13.27□□□□□ -0.29
RTN4-210ENST00000427710 GMPPAQ96IJ6 420 aaPredicted RBP13.27□□□□□ -0.29
RTN4-210ENST00000427710 ARL5BQ96KC2 179 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 RABEP2Q9H5N1 569 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 TIGARQ9NQ88 270 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 SERINC1Q9NRX5 453 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 ITGB1BP2Q9UKP3 347 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 NDUFAF1Q9Y375 327 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 EMC9Q9Y3B6 208 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 ALPK2Q86TB3 2170 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 CADP27708 2225 aa13.27□□□□□ -0.29
RTN4-210ENST00000427710 TMED7-TICAM2A0A0A6YYA0 188 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 CDHR4A6H8M9 788 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 CFAP73A6NFT4 308 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 C5orf58C9J3I9 102 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 CTAG2O75638 210 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 PGM3O95394 542 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 FESP07332 822 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 BMP2P12643 396 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 TACR3P29371 465 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 AGTR1P30556 359 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 CCKARP32238 428 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 CD79BP40259 229 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 APOBEC1P41238 236 aaKnown RBP13.26□□□□□ -0.29
RTN4-210ENST00000427710 ACAA2P42765 397 aaKnown RBP13.26□□□□□ -0.29
RTN4-210ENST00000427710 MTPNP58546 118 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 SORDQ00796 357 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 CAPRIN1Q14444 709 aaKnown RBP13.26□□□□□ -0.29
RTN4-210ENST00000427710 LARS2Q15031 903 aaKnown RBP13.26□□□□□ -0.29
RTN4-210ENST00000427710 POU4F3Q15319 338 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 ZNF311Q5JNZ3 666 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.26□□□□□ -0.29
RTN4-210ENST00000427710 CADM2Q8N3J6 435 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 OR6K3Q8NGY3 331 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 RNF128Q8TEB7 428 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 SIKE1Q9BRV8 207 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 KLHL4Q9C0H6 718 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 MED4Q9NPJ6 270 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 CHRNA9Q9UGM1 479 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 OSGIN1Q9UJX0 560 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 TMED7Q9Y3B3 224 aa13.26□□□□□ -0.29
RTN4-210ENST00000427710 PRRC2AP48634 2157 aaKnown RBP13.25□□□□□ -0.29
RTN4-210ENST00000427710 ZC3H12DA2A288 527 aaKnown RBP13.25□□□□□ -0.29
RTN4-210ENST00000427710 SH3D21A4FU49 640 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 A6NNC1 897 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 EVPLLA8MZ36 301 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 SULT2B1O00204 365 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 FBP2O00757 339 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 ANGPT2O15123 496 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 SMAD9O15198 467 aaKnown RBP13.25□□□□□ -0.29
RTN4-210ENST00000427710 PABPC4LP0CB38 370 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms