RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 DIO1P49895 249 aa16.41■□□□□ 0.22
GPC1-205ENST00000427506 PPP2R2AP63151 447 aa16.41■□□□□ 0.22
GPC1-205ENST00000427506 CSNK2A1P68400 391 aaPredicted RBP16.41■□□□□ 0.22
GPC1-205ENST00000427506 RASGEF1BQ0VAM2 473 aa16.41■□□□□ 0.22
GPC1-205ENST00000427506 SYT14P1Q58G82 188 aa16.41■□□□□ 0.22
GPC1-205ENST00000427506 MSANTD1Q6ZTZ1 278 aa16.41■□□□□ 0.22
GPC1-205ENST00000427506 C22orf34Q6ZV56 151 aa16.41■□□□□ 0.22
GPC1-205ENST00000427506 GRINAQ7Z429 371 aa16.41■□□□□ 0.22
GPC1-205ENST00000427506 CMIPQ8IY22 773 aa16.41■□□□□ 0.22
GPC1-205ENST00000427506 PEX5LQ8IYB4 626 aa16.41■□□□□ 0.22
GPC1-205ENST00000427506 VPS33AQ96AX1 596 aa16.41■□□□□ 0.22
GPC1-205ENST00000427506 CCDC106Q9BWC9 280 aa16.41■□□□□ 0.22
GPC1-205ENST00000427506 ACTR6Q9GZN1 396 aa16.41■□□□□ 0.22
GPC1-205ENST00000427506 SLCO1B3Q9NPD5 702 aa16.41■□□□□ 0.22
GPC1-205ENST00000427506 TCF7L2Q9NQB0 619 aa16.41■□□□□ 0.22
GPC1-205ENST00000427506 CHRNA9Q9UGM1 479 aa16.41■□□□□ 0.22
GPC1-205ENST00000427506 GPR52Q9Y2T5 361 aa16.41■□□□□ 0.22
GPC1-205ENST00000427506 AKAP9Q99996 3911 aa16.41■□□□□ 0.22
GPC1-205ENST00000427506 FAM234BA2RU67 622 aa16.4■□□□□ 0.22
GPC1-205ENST00000427506 SIAH2O43255 324 aa16.4■□□□□ 0.22
GPC1-205ENST00000427506 TGDSO95455 350 aa16.4■□□□□ 0.22
GPC1-205ENST00000427506 DBIP07108 87 aaKnown RBP16.4■□□□□ 0.22
GPC1-205ENST00000427506 ETFAP13804 333 aa16.4■□□□□ 0.22
GPC1-205ENST00000427506 CCNA2P20248 432 aa16.4■□□□□ 0.22
GPC1-205ENST00000427506 MAGEA8P43361 318 aa16.4■□□□□ 0.22
GPC1-205ENST00000427506 GTDC1Q4AE62 458 aa16.4■□□□□ 0.22
GPC1-205ENST00000427506 TTMPQ5BVD1 217 aa16.4■□□□□ 0.22
GPC1-205ENST00000427506 ALKBH2Q6NS38 261 aa16.4■□□□□ 0.22
GPC1-205ENST00000427506 TFAP2EQ6VUC0 442 aa16.4■□□□□ 0.22
GPC1-205ENST00000427506 TMPPEQ6ZT21 453 aa16.4■□□□□ 0.22
GPC1-205ENST00000427506 CXorf67Q86X51 503 aaPredicted RBP16.4■□□□□ 0.22
GPC1-205ENST00000427506 PMM1Q92871 262 aa16.4■□□□□ 0.22
GPC1-205ENST00000427506 DNAJA3Q96EY1 480 aa16.4■□□□□ 0.22
GPC1-205ENST00000427506 UBTD1Q9HAC8 227 aa16.4■□□□□ 0.22
GPC1-205ENST00000427506 TPT1P8Q9HAU6 139 aa16.4■□□□□ 0.22
GPC1-205ENST00000427506 ARGLU1Q9NWB6 273 aaPredicted RBP16.4■□□□□ 0.22
GPC1-205ENST00000427506 CALML5Q9NZT1 146 aa16.4■□□□□ 0.22
GPC1-205ENST00000427506 TMEM247A6NEH6 219 aa16.39■□□□□ 0.21
GPC1-205ENST00000427506 AP3D1O14617 1153 aa16.39■□□□□ 0.21
GPC1-205ENST00000427506 SMAD9O15198 467 aaKnown RBP16.39■□□□□ 0.21
GPC1-205ENST00000427506 CYTIPO60759 359 aa16.39■□□□□ 0.21
GPC1-205ENST00000427506 BCHEP06276 602 aa16.39■□□□□ 0.21
GPC1-205ENST00000427506 THBDP07204 575 aa16.39■□□□□ 0.21
GPC1-205ENST00000427506 FESP07332 822 aa16.39■□□□□ 0.21
GPC1-205ENST00000427506 CD99P14209 185 aa16.39■□□□□ 0.21
GPC1-205ENST00000427506 UQCRBP14927 111 aa16.39■□□□□ 0.21
GPC1-205ENST00000427506 PSMB1P20618 241 aaKnown RBP16.39■□□□□ 0.21
GPC1-205ENST00000427506 FKBP2P26885 142 aaKnown RBP16.39■□□□□ 0.21
GPC1-205ENST00000427506 HTR3AP46098 478 aa16.39■□□□□ 0.21
GPC1-205ENST00000427506 DSTNP60981 165 aa16.39■□□□□ 0.21
GPC1-205ENST00000427506 MRPL2Q5T653 305 aaKnown RBP16.39■□□□□ 0.21
GPC1-205ENST00000427506 HDXQ7Z353 690 aa16.39■□□□□ 0.21
GPC1-205ENST00000427506 WFDC8Q8IUA0 241 aa16.39■□□□□ 0.21
GPC1-205ENST00000427506 TGIF2LYQ8IUE0 185 aa16.39■□□□□ 0.21
GPC1-205ENST00000427506 STEAP2Q8NFT2 490 aa16.39■□□□□ 0.21
GPC1-205ENST00000427506 ZNF775Q96BV0 537 aaPredicted RBP16.39■□□□□ 0.21
GPC1-205ENST00000427506 ZHX1-C8orf76Q96EF9 292 aa16.39■□□□□ 0.21
GPC1-205ENST00000427506 AURKBQ96GD4 344 aaPredicted RBP16.39■□□□□ 0.21
GPC1-205ENST00000427506 PSD2Q9BQI7 771 aa16.39■□□□□ 0.21
GPC1-205ENST00000427506 HDHD5Q9BXW7 423 aa16.39■□□□□ 0.21
GPC1-205ENST00000427506 CACYBPQ9HB71 228 aaKnown RBP16.39■□□□□ 0.21
GPC1-205ENST00000427506 F8P00451 2351 aa16.38■□□□□ 0.21
GPC1-205ENST00000427506 CFAP73A6NFT4 308 aa16.38■□□□□ 0.21
GPC1-205ENST00000427506 CD53P19397 219 aa16.38■□□□□ 0.21
GPC1-205ENST00000427506 KLK2P20151 261 aa16.38■□□□□ 0.21
GPC1-205ENST00000427506 IL32P24001 234 aa16.38■□□□□ 0.21
GPC1-205ENST00000427506 IDH3AP50213 366 aa16.38■□□□□ 0.21
GPC1-205ENST00000427506 MVDP53602 400 aa16.38■□□□□ 0.21
GPC1-205ENST00000427506 CRISP3P54108 245 aa16.38■□□□□ 0.21
GPC1-205ENST00000427506 PLAURQ03405 335 aa16.38■□□□□ 0.21
GPC1-205ENST00000427506 BEX5Q5H9J7 111 aa16.38■□□□□ 0.21
GPC1-205ENST00000427506 SLC2A7Q6PXP3 512 aa16.38■□□□□ 0.21
GPC1-205ENST00000427506 ADGRG3Q86Y34 549 aa16.38■□□□□ 0.21
GPC1-205ENST00000427506 OR52P1PQ8NH57 321 aa16.38■□□□□ 0.21
GPC1-205ENST00000427506 HS3ST6Q96QI5 342 aa16.38■□□□□ 0.21
GPC1-205ENST00000427506 ZNF300Q96RE9 604 aaPredicted RBP16.38■□□□□ 0.21
GPC1-205ENST00000427506 EBF4Q9BQW3 602 aa16.38■□□□□ 0.21
GPC1-205ENST00000427506 OR10A4Q9H209 315 aa16.38■□□□□ 0.21
GPC1-205ENST00000427506 BCO1Q9HAY6 547 aa16.38■□□□□ 0.21
GPC1-205ENST00000427506 INTS9Q9NV88 658 aaKnown RBP16.38■□□□□ 0.21
GPC1-205ENST00000427506 THUMPD1Q9NXG2 353 aaKnown RBP16.38■□□□□ 0.21
GPC1-205ENST00000427506 HDGFL3Q9Y3E1 203 aa16.38■□□□□ 0.21
GPC1-205ENST00000427506 HRNRQ86YZ3 2850 aaPredicted RBP16.38■□□□□ 0.21
GPC1-205ENST00000427506 TMED7-TICAM2A0A0A6YYA0 188 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 HMGB1P1B2RPK0 211 aaPredicted RBP16.37■□□□□ 0.21
GPC1-205ENST00000427506 ADAM11O75078 769 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 GCM2O75603 506 aaPredicted RBP16.37■□□□□ 0.21
GPC1-205ENST00000427506 ADAP00813 363 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 FPR1P21462 350 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 RPS4Y1P22090 263 aaKnown RBP16.37■□□□□ 0.21
GPC1-205ENST00000427506 CLK1P49759 484 aaKnown RBP16.37■□□□□ 0.21
GPC1-205ENST00000427506 POLR2HP52434 150 aaKnown RBP16.37■□□□□ 0.21
GPC1-205ENST00000427506 AQP5P55064 265 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 OR2B6P58173 313 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 TSC22D1Q15714 1073 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 ACKR1Q16570 336 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 LIN52Q52LA3 116 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 MTDHQ86UE4 582 aaKnown RBP16.37■□□□□ 0.21
GPC1-205ENST00000427506 VRK2Q86Y07 508 aa16.37■□□□□ 0.21
GPC1-205ENST00000427506 ZNF440Q8IYI8 595 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms