RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 PAGE2Q7Z2X7 111 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 ADCK2Q7Z695 626 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 FAM9CQ8IZT9 166 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 CA13Q8N1Q1 262 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 KRTCAP2Q8N6L1 136 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 TEX45Q8NA69 505 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 FNDC5Q8NAU1 212 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 OR9I1Q8NGQ6 314 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 GOT1L1Q8NHS2 421 aaPredicted RBP5□□□□□ -1.61
C9orf3-205ENST00000427193 C16orf78Q8WTQ4 265 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 UCN3Q969E3 161 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 RERGQ96A58 199 aaPredicted RBP5□□□□□ -1.61
C9orf3-205ENST00000427193 ERP27Q96DN0 273 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 PPP1R36Q96LQ0 422 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 CATSPER2Q96P56 530 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 MAPKAP1Q9BPZ7 522 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 C17orf62Q9BQA9 187 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 GPATCH1Q9BRR8 931 aaKnown RBP5□□□□□ -1.61
C9orf3-205ENST00000427193 SLC25A33Q9BSK2 321 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 C1orf50Q9BV19 199 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 DDA1Q9BW61 102 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 IFT27Q9BW83 186 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 ROGDIQ9GZN7 287 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 APMAPQ9HDC9 416 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 CUTCQ9NTM9 273 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 AHSPQ9NZD4 102 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 ARMCX1Q9P291 453 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 BAIAP2L1Q9UHR4 511 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 OSGIN2Q9Y236 505 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 NAALAD2Q9Y3Q0 740 aa5□□□□□ -1.61
C9orf3-205ENST00000427193 POLR3HQ9Y535 204 aaPredicted RBP5□□□□□ -1.61
C9orf3-205ENST00000427193 A0A1B0GX78 115 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 A0A1W2PP18 115 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 WASHC1A8K0Z3 465 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 MYO1GB0I1T2 1018 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 NVLO15381 856 aaKnown RBP4.99□□□□□ -1.61
C9orf3-205ENST00000427193 BUB3O43684 328 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 SLC22A3O75751 556 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 OR2B3O76000 313 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 PSMG1O95456 288 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 AIFM1O95831 613 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 CLDN1O95832 211 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 STATHP02808 62 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 GBAP04062 536 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 CYC1P08574 325 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 IL3P08700 152 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 FAM58BPP0C7Q3 252 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 LAMP1P11279 417 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 FCGR2AP12318 317 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 IL1RNP18510 177 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 IL10P22301 178 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 CSTF2P33240 577 aaKnown RBP eCLIP4.99□□□□□ -1.61
C9orf3-205ENST00000427193 UQCRFS1P47985 274 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 MVDP53602 400 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 MAPK12P53778 367 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 ARSFP54793 590 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 BTN3A2P78410 334 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 MC1RQ01726 317 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 TNFRSF17Q02223 184 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 SLAMF1Q13291 335 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 ALKBH1Q13686 389 aaKnown RBP4.99□□□□□ -1.61
C9orf3-205ENST00000427193 IMPG1Q17R60 797 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 DEFB134Q4QY38 66 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 SPANXN4Q5MJ08 99 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 LRIF1Q5T3J3 769 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 ATPAF1Q5TC12 328 aaPredicted RBP4.99□□□□□ -1.61
C9orf3-205ENST00000427193 NDUFAF5Q5TEU4 345 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 SLC48A1Q6P1K1 146 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 TRIM40Q6P9F5 258 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 HACD2Q6Y1H2 254 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 ASRGL1Q7L266 308 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 SERPINA11Q86U17 422 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 GPR180Q86V85 440 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 MSRB3Q8IXL7 192 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 DSELQ8IZU8 1212 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 LIX1Q8N485 282 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 OR5T3Q8NGG3 340 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 OR9A4Q8NGU2 314 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 WDR36Q8NI36 951 aaKnown RBP4.99□□□□□ -1.61
C9orf3-205ENST00000427193 GTF2H4Q92759 462 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 ANKRD9Q96BM1 317 aaPredicted RBP4.99□□□□□ -1.61
C9orf3-205ENST00000427193 CNRIP1Q96F85 164 aaPredicted RBP4.99□□□□□ -1.61
C9orf3-205ENST00000427193 CCDC115Q96NT0 180 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 TSSK3Q96PN8 268 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 OR1F2PQ96R84 312 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 OR6C1Q96RD1 312 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 CSF3RQ99062 836 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 CMKLR1Q99788 373 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 C1orf21Q9H246 121 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 REEP4Q9H6H4 257 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 AKIRIN1Q9H9L7 192 aaPredicted RBP4.99□□□□□ -1.61
C9orf3-205ENST00000427193 ACSS1Q9NUB1 689 aaPredicted RBP4.99□□□□□ -1.61
C9orf3-205ENST00000427193 SOHLH2Q9NX45 425 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 LYARQ9NX58 379 aaKnown RBP4.99□□□□□ -1.61
C9orf3-205ENST00000427193 MS4A12Q9NXJ0 267 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 EIF3LQ9Y262 564 aaKnown RBP4.99□□□□□ -1.61
C9orf3-205ENST00000427193 CAPN7Q9Y6W3 813 aa4.99□□□□□ -1.61
C9orf3-205ENST00000427193 FN1P02751 2386 aaKnown RBP4.99□□□□□ -1.61
C9orf3-205ENST00000427193 DIDO1Q9BTC0 2240 aaKnown RBP4.99□□□□□ -1.61
C9orf3-205ENST00000427193 DCHS2Q6V1P9 2916 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms