RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 CNEP1R1Q8N9A8 125 aa16.16■□□□□ 0.18
HERC3-205ENST00000426683 ACBD4Q8NC06 268 aa16.16■□□□□ 0.18
HERC3-205ENST00000426683 LRRC58Q96CX6 371 aa16.16■□□□□ 0.18
HERC3-205ENST00000426683 LRRC46Q96FV0 321 aa16.16■□□□□ 0.18
HERC3-205ENST00000426683 SLC39A3Q9BRY0 314 aa16.16■□□□□ 0.18
HERC3-205ENST00000426683 CCDC106Q9BWC9 280 aa16.16■□□□□ 0.18
HERC3-205ENST00000426683 SRXN1Q9BYN0 137 aa16.16■□□□□ 0.18
HERC3-205ENST00000426683 COQ10BQ9H8M1 238 aa16.16■□□□□ 0.18
HERC3-205ENST00000426683 TIGARQ9NQ88 270 aa16.16■□□□□ 0.18
HERC3-205ENST00000426683 SPIN1Q9Y657 262 aaPredicted RBP16.16■□□□□ 0.18
HERC3-205ENST00000426683 A0A1W2PNR3 127 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 SYT5O00445 386 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 FAAHO00519 579 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 IGFBP2P18065 325 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 DRD4P21917 467 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 AQP1P29972 269 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 RBBP4Q09028 425 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 FBXL19-AS1Q494R0 122 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 NANOGP8Q6NSW7 305 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 VWA1Q6PCB0 445 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 ZNF550Q7Z398 422 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 CPLX4Q7Z7G2 160 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 KRT73Q86Y46 540 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 PTOV1Q86YD1 416 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 C11orf65Q8NCR3 313 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 HIPK4Q8NE63 616 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 SLC25A43Q8WUT9 341 aaPredicted RBP16.15■□□□□ 0.18
HERC3-205ENST00000426683 RNASE6Q93091 150 aaKnown RBP16.15■□□□□ 0.18
HERC3-205ENST00000426683 CPNE4Q96A23 557 aaPredicted RBP16.15■□□□□ 0.18
HERC3-205ENST00000426683 OR5B2Q96R09 309 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 SPATA5L1Q9BVQ7 753 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 PIGMQ9H3S5 423 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 KAT8Q9H7Z6 458 aaKnown RBP16.15■□□□□ 0.18
HERC3-205ENST00000426683 NANOGQ9H9S0 305 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 JKAMPQ9P055 326 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 CHRNA9Q9UGM1 479 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 PACSIN3Q9UKS6 424 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 ANGPT4Q9Y264 503 aa16.15■□□□□ 0.18
HERC3-205ENST00000426683 SETXQ7Z333 2677 aaKnown RBP16.15■□□□□ 0.18
HERC3-205ENST00000426683 NBPF19A0A087WUL8 3843 aa16.14■□□□□ 0.17
HERC3-205ENST00000426683 FXYD1O00168 92 aa16.14■□□□□ 0.17
HERC3-205ENST00000426683 TFPIP10646 304 aa16.14■□□□□ 0.17
HERC3-205ENST00000426683 CCNA2P20248 432 aa16.14■□□□□ 0.17
HERC3-205ENST00000426683 TACR3P29371 465 aa16.14■□□□□ 0.17
HERC3-205ENST00000426683 PRKAR1BP31321 381 aa16.14■□□□□ 0.17
HERC3-205ENST00000426683 ACAA2P42765 397 aaKnown RBP16.14■□□□□ 0.17
HERC3-205ENST00000426683 SLC1A3P43003 542 aa16.14■□□□□ 0.17
HERC3-205ENST00000426683 KIR2DL2P43627 348 aaPredicted RBP16.14■□□□□ 0.17
HERC3-205ENST00000426683 HTR3AP46098 478 aa16.14■□□□□ 0.17
HERC3-205ENST00000426683 ZNF239Q16600 458 aaKnown RBP16.14■□□□□ 0.17
HERC3-205ENST00000426683 SYT14P1Q58G82 188 aa16.14■□□□□ 0.17
HERC3-205ENST00000426683 NET1Q7Z628 596 aaPredicted RBP16.14■□□□□ 0.17
HERC3-205ENST00000426683 LUZP2Q86TE4 346 aa16.14■□□□□ 0.17
HERC3-205ENST00000426683 SERPINA11Q86U17 422 aa16.14■□□□□ 0.17
HERC3-205ENST00000426683 MTDHQ86UE4 582 aaKnown RBP16.14■□□□□ 0.17
HERC3-205ENST00000426683 ADGRG3Q86Y34 549 aa16.14■□□□□ 0.17
HERC3-205ENST00000426683 DMRTC2Q8IXT2 367 aaPredicted RBP16.14■□□□□ 0.17
HERC3-205ENST00000426683 ZZZ3Q8IYH5 903 aa16.14■□□□□ 0.17
HERC3-205ENST00000426683 POU5F2Q8N7G0 328 aa16.14■□□□□ 0.17
HERC3-205ENST00000426683 PCYOX1LQ8NBM8 494 aa16.14■□□□□ 0.17
HERC3-205ENST00000426683 OR10A6Q8NH74 314 aa16.14■□□□□ 0.17
HERC3-205ENST00000426683 RP9Q8TA86 221 aaKnown RBP16.14■□□□□ 0.17
HERC3-205ENST00000426683 ROBO4Q8WZ75 1007 aa16.14■□□□□ 0.17
HERC3-205ENST00000426683 REXO5Q96IC2 774 aaKnown RBP16.14■□□□□ 0.17
HERC3-205ENST00000426683 ZNF607Q96SK3 696 aa16.14■□□□□ 0.17
HERC3-205ENST00000426683 SH3GL1Q99961 368 aa16.14■□□□□ 0.17
HERC3-205ENST00000426683 OSGIN1Q9UJX0 560 aa16.14■□□□□ 0.17
HERC3-205ENST00000426683 CLEC4AQ9UMR7 237 aa16.14■□□□□ 0.17
HERC3-205ENST00000426683 CACNA1CQ13936 2221 aa16.14■□□□□ 0.17
HERC3-205ENST00000426683 HEATR5AQ86XA9 2040 aa16.13■□□□□ 0.17
HERC3-205ENST00000426683 TMED7-TICAM2A0A0A6YYA0 188 aa16.13■□□□□ 0.17
HERC3-205ENST00000426683 FRS3O43559 492 aa16.13■□□□□ 0.17
HERC3-205ENST00000426683 SNX3O60493 162 aa16.13■□□□□ 0.17
HERC3-205ENST00000426683 SMNDC1O75940 238 aaKnown RBP eCLIP16.13■□□□□ 0.17
HERC3-205ENST00000426683 PLGP00747 810 aaPredicted RBP16.13■□□□□ 0.17
HERC3-205ENST00000426683 NPPAP01160 153 aa16.13■□□□□ 0.17
HERC3-205ENST00000426683 PRG2P13727 222 aa16.13■□□□□ 0.17
HERC3-205ENST00000426683 CPA2P48052 419 aa16.13■□□□□ 0.17
HERC3-205ENST00000426683 POLR2HP52434 150 aaKnown RBP16.13■□□□□ 0.17
HERC3-205ENST00000426683 COPZ1P61923 177 aa16.13■□□□□ 0.17
HERC3-205ENST00000426683 RABL3Q5HYI8 236 aa16.13■□□□□ 0.17
HERC3-205ENST00000426683 BTLAQ7Z6A9 289 aa16.13■□□□□ 0.17
HERC3-205ENST00000426683 MCEMP1Q8IX19 187 aa16.13■□□□□ 0.17
HERC3-205ENST00000426683 CADM2Q8N3J6 435 aa16.13■□□□□ 0.17
HERC3-205ENST00000426683 OR8J3Q8NGG0 315 aa16.13■□□□□ 0.17
HERC3-205ENST00000426683 RCN3Q96D15 328 aa16.13■□□□□ 0.17
HERC3-205ENST00000426683 STARD4Q96DR4 205 aa16.13■□□□□ 0.17
HERC3-205ENST00000426683 GMPPAQ96IJ6 420 aaPredicted RBP16.13■□□□□ 0.17
HERC3-205ENST00000426683 RSPO3Q9BXY4 272 aaPredicted RBP16.13■□□□□ 0.17
HERC3-205ENST00000426683 PIF1Q9H611 641 aa16.13■□□□□ 0.17
HERC3-205ENST00000426683 GID8Q9NWU2 228 aa16.13■□□□□ 0.17
HERC3-205ENST00000426683 FOXD3Q9UJU5 478 aaPredicted RBP16.13■□□□□ 0.17
HERC3-205ENST00000426683 TMED7Q9Y3B3 224 aa16.13■□□□□ 0.17
HERC3-205ENST00000426683 DOCK7Q96N67 2140 aa16.13■□□□□ 0.17
HERC3-205ENST00000426683 TPST1O60507 370 aa16.12■□□□□ 0.17
HERC3-205ENST00000426683 SERPINB7O75635 380 aa16.12■□□□□ 0.17
HERC3-205ENST00000426683 COX4I1P13073 169 aa16.12■□□□□ 0.17
HERC3-205ENST00000426683 PRF1P14222 555 aa16.12■□□□□ 0.17
HERC3-205ENST00000426683 GZMMP51124 257 aa16.12■□□□□ 0.17
HERC3-205ENST00000426683 RAC3P60763 192 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms