RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 LIMS1P48059 325 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 ALG10BQ5I7T1 473 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 C1orf94Q6P1W5 598 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 RLN3Q8WXF3 142 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 SMPDL3BQ92485 455 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 ABHD1Q96SE0 405 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 ATF6BQ99941 703 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 GINS4Q9BRT9 223 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 PCBD2Q9H0N5 130 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 PRDM7Q9NQW5 492 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 TMEM5Q9Y2B1 443 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 NCOR1O75376 2440 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 A0A0A6YYC8 382 aaPredicted RBP12.38□□□□□ -0.43
USP42-203ENST00000426246 I3L1I5 382 aaPredicted RBP12.38□□□□□ -0.43
USP42-203ENST00000426246 SIX6O95475 246 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 ADH1BP00325 375 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 CTSBP07858 339 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 CXCL3P19876 107 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 HOXD11P31277 338 aaPredicted RBP12.38□□□□□ -0.43
USP42-203ENST00000426246 SNTB2Q13425 540 aaKnown RBP12.38□□□□□ -0.43
USP42-203ENST00000426246 ATXN7L3Q14CW9 347 aaPredicted RBP12.38□□□□□ -0.43
USP42-203ENST00000426246 LRRC37A5PQ49AS3 106 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 SLC48A1Q6P1K1 146 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 TRIM63Q969Q1 353 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 ARHGAP9Q9BRR9 750 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 RNF32Q9H0A6 362 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 CLEC4MQ9H2X3 399 aaPredicted RBP12.38□□□□□ -0.43
USP42-203ENST00000426246 ZMAT3Q9HA38 289 aaKnown RBP12.38□□□□□ -0.43
USP42-203ENST00000426246 EVA1BQ9NVM1 165 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 SOHLH2Q9NX45 425 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 A0A0A6YYJ9 748 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 P2RX6O15547 441 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 GPANK1O95872 356 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 DRD2P14416 443 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 YOD1Q5VVQ6 348 aaPredicted RBP12.38□□□□□ -0.43
USP42-203ENST00000426246 OR5M10Q6IEU7 315 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 ARMC6Q6NXE6 501 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 CHRDL2Q6WN34 429 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 SHISA6Q6ZSJ9 500 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 SSX6Q7RTT6 188 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 SIPA1Q96FS4 1042 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 PINK1Q9BXM7 581 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 ZNF69Q9UC07 566 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 SPTBN2O15020 2390 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 CLEC3AO75596 197 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 F3P13726 295 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 CTSEP14091 401 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 HOXB2P14652 356 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 FOXL2P58012 376 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 NDUFA9Q16795 377 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 SIAH3Q8IW03 269 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 THAP3Q8WTV1 239 aaPredicted RBP12.38□□□□□ -0.43
USP42-203ENST00000426246 RASD2Q96D21 266 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 ZSCAN32Q9NX65 697 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 KCND3Q9UK17 655 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 SLC6A5Q9Y345 797 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 SPEF1Q9Y4P9 236 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 SPACA6W5XKT8 324 aa12.38□□□□□ -0.43
USP42-203ENST00000426246 ERVH48-1M5A8F1 160 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 SURF4O15260 269 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 FGF17O60258 216 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 CTSVO60911 334 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 FZD7O75084 574 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 MT-ND5P03915 603 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 OPN1LWP04000 364 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 HMGN1P05114 100 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 ETV6P41212 452 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 EVX1P49640 407 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 ARHGDIBP52566 201 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 ZNF33BQ06732 778 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 C3orf38Q5JPI3 329 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 WDR88Q6ZMY6 472 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 CLDN22Q8N7P3 220 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 THEM6Q8WUY1 208 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 HS6ST2Q96MM7 605 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 TEX101Q9BY14 249 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 CBLCQ9ULV8 474 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 RCE1Q9Y256 329 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 C17orf113A0A1B0GUU1 675 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 PCP4L1A6NKN8 68 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 HRKO00198 91 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 PLRG1O43660 514 aaKnown RBP12.37□□□□□ -0.43
USP42-203ENST00000426246 SELENOFO60613 162 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 RGS9O75916 674 aaPredicted RBP12.37□□□□□ -0.43
USP42-203ENST00000426246 ZIC2O95409 532 aaPredicted RBP12.37□□□□□ -0.43
USP42-203ENST00000426246 TP53P04637 393 aaPredicted RBP12.37□□□□□ -0.43
USP42-203ENST00000426246 NTSR1P30989 418 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 FOXK2Q01167 660 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 RUNX2Q13950 521 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 OCLNQ16625 522 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 SFXN4Q6P4A7 337 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 QSOX2Q6ZRP7 698 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 NR2C2APQ86WQ0 139 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 MEIOBQ8N635 442 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 ZNF527Q8NB42 609 aa12.37□□□□□ -0.43
USP42-203ENST00000426246 NARS2Q96I59 477 aaKnown RBP12.37□□□□□ -0.43
USP42-203ENST00000426246 METTL2AQ96IZ6 378 aaKnown RBP12.37□□□□□ -0.43
USP42-203ENST00000426246 KRCC1Q9NPI7 259 aaPredicted RBP12.37□□□□□ -0.43
USP42-203ENST00000426246 ACSS1Q9NUB1 689 aaPredicted RBP12.37□□□□□ -0.43
USP42-203ENST00000426246 ACSL5Q9ULC5 683 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms